FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG10009-RA through 18771 annotations produced 1 hits

Noa36 (Noa36):

Annotation Number : CG10009
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0026400
Gbrowse : chr3R:24423779-24425001 (-) // 100.0 //
Probeset : 1640673_at
Accessions : protein= NP_651622;, nucleotide= NM_143365;
Pathway : "0000775 // chromosome
Interpro : centromeric region // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electroni
FlyMine data for FBgn0026400.
BDGP gene expression has embryonic in situ data for Noa36: 21 pix of staining in 15 body parts.
BioGrid reports that CG10009 interacts with CG11635 CG3062 CG12679 CG14546 CG1792 CG31122 CG32183 CG3319 CG6945 CG9778 CG1133 .
VDRC has 3 RNAi stocks for FBgn0026400 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	219 ± 10	4 of 4	0.60	Down
Head	213 ± 3	4 of 4	0.60	Down
Eye	339 ± 4	4 of 4	0.89	None
Thoracicoabdominal ganglion	212 ± 9	4 of 4	0.60	Down
Salivary gland	430 ± 10	4 of 4	1.13	None
Crop	339 ± 7	4 of 4	0.90	None
Midgut	235 ± 8	4 of 4	0.60	Down
Tubule	333 ± 16	4 of 4	0.90	Down
Hindgut	262 ± 7	4 of 4	0.70	Down
Heart	250 ± 6	4 of 4	0.66	Down
Fat body	246 ± 33	4 of 4	0.65	Down
Ovary	564 ± 9	4 of 4	1.50	Up
Testis	471 ± 10	4 of 4	1.20	Up
Male accessory glands	320 ± 16	4 of 4	0.80	None
Virgin spermatheca	226 ± 8	4 of 4	0.59	Down
Mated spermatheca	206 ± 13	4 of 4	0.54	Down
Adult carcass	234 ± 2	4 of 4	0.60	Down
Larval CNS	291 ± 13	4 of 4	0.76	Down
Larval Salivary gland	679 ± 57	4 of 4	1.78	Up
Larval midgut	184 ± 7	4 of 4	0.48	Down
Larval tubule	298 ± 5	4 of 4	0.80	Down
Larval hindgut	274 ± 11	4 of 4	0.72	Down
Larval fat body	229 ± 10	4 of 4	0.60	Down
Larval trachea	478 ± 52	4 of 4	1.25	Up
Larval carcass	339 ± 11	4 of 4	0.89	None
S2 cells (growing)	427 ± 7	4 of 4	1.12	None
Whole fly	382 ± 22	4 of 4

Looking for CG10009-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720