FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG10023-RA through 18771 annotations produced 1 hits

Focal Adhesion Kinase (Fak56D):

Annotation Number : CG10023
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0020440
Gbrowse : chr2R:15318159-15324747 (-) // 99.89 //
Probeset : 1626790_s_at
Accessions : protein= NP_001137718; /// NP_001137719; /// NP_001163207; /// NP_523793; /// NP_725891; /// NP_725892;, nucleotide= NM_001144246; /// NM_001144247; /// NM_001169736; /// NM_079069; /// NM_166352; /// NM_166353;
Pathway : 0005856 // cytoskeleton // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from electronic
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred
FlyMine data for FBgn0020440.
BDGP gene expression has embryonic in situ data for Fak56D: 4 pix of staining in 1 body parts.
Homophila reports that CG10023 is a close match (8e-11) to human gene NPR2;ANPRB;AMDM (NP_003986), a gene associated with Acromesomelic dysplasia, Maroteaux type, 602875 (3).
BioGrid reports that CG10023 interacts with CG11656 CG15772 CG4799 .
TRiP has 3 RNAi stocks for FBgn0020440 available for purchase.
VDRC has 2 RNAi stocks for FBgn0020440 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	96 ± 2	4 of 4	3.70	Up
Head	31 ± 1	4 of 4	1.20	None
Eye	37 ± 1	4 of 4	1.41	Up
Thoracicoabdominal ganglion	85 ± 4	4 of 4	3.20	Up
Salivary gland	79 ± 7	4 of 4	3.03	Up
Crop	48 ± 5	4 of 4	1.90	Up
Midgut	21 ± 2	2 of 4	0.80	None
Tubule	63 ± 0	4 of 4	2.40	Up
Hindgut	33 ± 2	4 of 4	1.30	None
Heart	24 ± 4	4 of 4	0.94	None
Fat body	34 ± 6	4 of 4	1.30	None
Ovary	72 ± 3	4 of 4	2.80	Up
Testis	16 ± 0	4 of 4	0.60	Down
Male accessory glands	31 ± 2	4 of 4	1.20	None
Virgin spermatheca	51 ± 6	4 of 4	1.95	Up
Mated spermatheca	44 ± 6	4 of 4	1.68	None
Adult carcass	27 ± 3	4 of 4	1.00	None
Larval CNS	133 ± 7	4 of 4	5.08	Up
Larval Salivary gland	134 ± 16	4 of 4	5.11	Up
Larval midgut	38 ± 1	4 of 4	1.47	Up
Larval tubule	61 ± 3	4 of 4	2.40	Up
Larval hindgut	40 ± 4	4 of 4	1.54	None
Larval fat body	58 ± 6	4 of 4	2.20	Up
Larval trachea	31 ± 5	4 of 4	1.22	None
Larval carcass	34 ± 2	4 of 4	1.30	None
S2 cells (growing)	49 ± 2	4 of 4	1.88	Up
Whole fly	26 ± 2	4 of 4

Looking for CG10023-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720