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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG10033-RA through 18771 annotations produced 1 hits



foraging (for):

Annotation Number : CG10033
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0000721
Gbrowse : chr2L:3622073-3656951 (-) // 100.0 //
Probeset : 1629886_s_at
Accessions : protein= NP_001014464; /// NP_001162858; /// NP_477487; /// NP_477488; /// NP_477489; /// NP_477490; /// NP_599146; /// NP_995626; /// NP_995627; /// NP_995628; /// NP_995629;, nucleotide= NM_001014464; /// NM_001169387; /// NM_058139; /// NM_058140; /// NM_058141; /// NM_058142; /// NM_134319; /// NM_205904; /// NM_205905; /// NM_205906; /// NM_205907;
Pathway : 0005886 // plasma membrane // inferred from direct assay
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred
FlyMine data for FBgn0000721.
BDGP gene expression has embryonic in situ data for for: 49 pix of staining in 34 body parts.
Homophila reports that CG10033 is a close match (9e-11) to human gene TYK2 (NP_003322), a gene associated with Protein-tyrosine kinase 2 deficiency, 611521 (3).
BioGrid reports that CG10033 interacts with CG11699 CG12052 CG12065 CG14228 CG4167 CG6779 CG7111 CG8173 CG9917 .
TRiP has 3 RNAi stocks for FBgn0000721 available for purchase.
VDRC has 3 RNAi stocks for FBgn0000721 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain265 14 of 4 0.20Down
Head1281 454 of 4 1.10None
Eye829 604 of 4 0.72Down
Thoracicoabdominal ganglion392 94 of 4 0.30Down
Salivary gland874 164 of 4 0.76Down
Crop1892 304 of 4 1.70Up
Midgut957 74 of 4 0.80Down
Tubule649 374 of 4 0.60Down
Hindgut851 94 of 4 0.70Down
Heart1845 454 of 4 1.61Up
Fat body3774 2464 of 4 3.30Up
Ovary1588 164 of 4 1.40Up
Testis182 104 of 4 0.20Down
Male accessory glands1046 654 of 4 0.90None
Virgin spermatheca4848 814 of 4 4.23Up
Mated spermatheca5031 1514 of 4 4.39Up
Adult carcass1995 834 of 4 1.70Up
Larval CNS375 184 of 4 0.33Down
Larval Salivary gland909 284 of 4 0.79Down
Larval midgut983 274 of 4 0.86Down
Larval tubule273 54 of 4 0.20Down
Larval hindgut843 394 of 4 0.74Down
Larval fat body3573 2894 of 4 3.10Up
Larval trachea1004 734 of 4 0.88Down
Larval carcass1602 1504 of 4 1.40None
S2 cells (growing)382 34 of 4 0.33Down
Whole fly1145 394 of 4

Looking for CG10033-RA. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime