FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG10069-RA through 18771 annotations produced 1 hits

(CG10069):

Annotation Number : CG10069
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0034611
Gbrowse : chr2R:17169804-17173174 (+) // 100.0 //
Probeset : 1622950_a_at
Accessions : protein= NP_611570; /// NP_726048; /// NP_726049;, nucleotide= NM_137726; /// NM_166434; /// NM_166435;
Interpro : 0015169 // glycerol-3-phosphate transmembrane transporter activity // inferred from sequence or structural similarity
FlyMine data for FBgn0034611.
BDGP gene expression has embryonic in situ data for CG10069: 4 pix of staining in 1 body parts.
BioGrid reports that CG10069 interacts with CG1417 .
VDRC has 3 RNAi stocks for FBgn0034611 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	148 ± 3	4 of 4	0.50	Down
Head	173 ± 4	4 of 4	0.60	Down
Eye	173 ± 7	4 of 4	0.62	Down
Thoracicoabdominal ganglion	135 ± 3	4 of 4	0.50	Down
Salivary gland	1311 ± 51	4 of 4	4.65	Up
Crop	235 ± 8	4 of 4	0.80	None
Midgut	477 ± 5	4 of 4	1.70	Up
Tubule	822 ± 24	4 of 4	2.90	Up
Hindgut	325 ± 10	4 of 4	1.20	None
Heart	332 ± 15	4 of 4	1.18	None
Fat body	405 ± 61	4 of 4	1.44	Up
Ovary	439 ± 20	4 of 4	1.60	Up
Testis	123 ± 5	4 of 4	0.40	Down
Male accessory glands	1493 ± 22	4 of 4	5.30	Up
Virgin spermatheca	978 ± 21	4 of 4	3.46	Up
Mated spermatheca	1009 ± 37	4 of 4	3.58	Up
Adult carcass	201 ± 10	4 of 4	0.70	Down
Larval CNS	214 ± 9	4 of 4	0.76	Down
Larval Salivary gland	1063 ± 29	4 of 4	3.77	Up
Larval midgut	632 ± 21	4 of 4	2.24	Up
Larval tubule	397 ± 8	4 of 4	1.40	Up
Larval hindgut	379 ± 26	4 of 4	1.34	Up
Larval fat body	330 ± 17	4 of 4	1.20	None
Larval trachea	299 ± 19	4 of 4	1.06	None
Larval carcass	299 ± 7	4 of 4	1.06	None
S2 cells (growing)	542 ± 4	4 of 4	1.92	Up
Whole fly	282 ± 20	4 of 4

Looking for CG10069-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720