Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG10083-RA through 18771 annotations produced 1 hits



Debrin-like (CG10083):

Annotation Number : CG10083
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0036372
Gbrowse : chr3L:13476632-13479398 (-) // 100.0 //
Probeset : 1633108_at
Accessions : protein= NP_648657;, nucleotide= NM_140400;
Pathway : 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic ann
Interpro : 0003779 // actin binding // inferred by curator /// 0003779 // actin binding // inferred from electronic annotation ///
FlyMine data for FBgn0036372.
BioGrid reports that CG10083 interacts with CG18069 .
TRiP has 1 RNAi stocks for FBgn0036372 available for purchase.
VDRC has 2 RNAi stocks for FBgn0036372 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain279 ± 64 of 4 1.20Up
Head161 ± 34 of 4 0.70Down
Eye194 ± 34 of 4 0.84None
Thoracicoabdominal ganglion248 ± 34 of 4 1.10None
Salivary gland138 ± 114 of 4 0.60Down
Crop174 ± 64 of 4 0.80Down
Midgut480 ± 274 of 4 2.10Up
Tubule330 ± 134 of 4 1.40Up
Hindgut159 ± 24 of 4 0.70Down
Heart90 ± 44 of 4 0.39Down
Fat body96 ± 144 of 4 0.42Down
Ovary537 ± 24 of 4 2.30Up
Testis77 ± 24 of 4 0.30Down
Male accessory glands60 ± 44 of 4 0.30Down
Virgin spermatheca106 ± 74 of 4 0.46Down
Mated spermatheca94 ± 24 of 4 0.41Down
Adult carcass86 ± 24 of 4 0.40Down
Larval CNS433 ± 144 of 4 1.87Up
Larval Salivary gland169 ± 54 of 4 0.73Down
Larval midgut765 ± 154 of 4 3.31Up
Larval tubule1061 ± 174 of 4 4.60Up
Larval hindgut431 ± 354 of 4 1.87Up
Larval fat body269 ± 264 of 4 1.20None
Larval trachea234 ± 184 of 4 1.01None
Larval carcass255 ± 174 of 4 1.10None
S2 cells (growing)252 ± 84 of 4 1.09None
Whole fly231 ± 134 of 4

Looking for CG10083-RA. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime