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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG10155-RA through 18771 annotations produced 1 hits



Sprouty-related protein with EVH-1 domain (Spred):

Annotation Number : CG10155
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0020767
Gbrowse : chr2R:10648654-10656927 (-) // 100.0 //
Probeset : 1639243_at
Accessions : protein= NP_610988;, nucleotide= NM_137144;
Pathway : 0016020 // membrane // inferred from electronic annotation
FlyMine data for FBgn0020767.
Homophila reports that CG10155 is a close match (8e-20) to human gene SPRED1;NFLS (NP_689807), a gene associated with Neurofibromatosis, type 1-like syndrome, 611431 (3).
BioGrid reports that CG10155 interacts with CG14251 CG10209 CG12273 CG2713 CG9331 .
TRiP has 1 RNAi stocks for FBgn0020767 available for purchase.
VDRC has 2 RNAi stocks for FBgn0020767 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain459 ± 314 of 4 5.70Up
Head87 ± 44 of 4 1.10None
Eye59 ± 54 of 4 0.73Down
Thoracicoabdominal ganglion412 ± 124 of 4 5.10Up
Salivary gland50 ± 54 of 4 0.63Down
Crop110 ± 54 of 4 1.40Up
Midgut42 ± 24 of 4 0.50Down
Tubule31 ± 04 of 4 0.40Down
Hindgut70 ± 34 of 4 0.90None
Heart49 ± 34 of 4 0.61Down
Fat body79 ± 154 of 4 0.98None
Ovary192 ± 44 of 4 2.40Up
Testis54 ± 34 of 4 0.70Down
Male accessory glands30 ± 34 of 4 0.40Down
Virgin spermatheca43 ± 44 of 4 0.54Down
Mated spermatheca46 ± 44 of 4 0.58Down
Adult carcass58 ± 54 of 4 0.70Down
Larval CNS413 ± 734 of 4 5.12Up
Larval Salivary gland67 ± 44 of 4 0.83None
Larval midgut86 ± 54 of 4 1.06None
Larval tubule65 ± 64 of 4 0.80None
Larval hindgut85 ± 64 of 4 1.06None
Larval fat body66 ± 14 of 4 0.80None
Larval trachea48 ± 84 of 4 0.60Down
Larval carcass66 ± 34 of 4 0.82None
S2 cells (growing)124 ± 44 of 4 1.54Up
Whole fly80 ± 54 of 4

Looking for CG10155-RA. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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