Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG10176-RA through 18771 annotations produced 1 hits



(CG10176):

Annotation Number : CG10176
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032682
Gbrowse : chr2L:18485486-18487710 (+) // 100.0 //
Probeset : 1636650_at
Accessions : protein= NP_609880;, nucleotide= NM_136036;
Interpro : 0005515 // protein binding // inferred from physical interaction
FlyMine data for FBgn0032682.
BDGP gene expression has embryonic in situ data for CG10176: 25 pix of staining in 17 body parts.
BioGrid reports that CG10176 interacts with CG7662 .
VDRC has 2 RNAi stocks for FBgn0032682 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain3 ± 10 of 4 0.10Down
Head127 ± 54 of 4 3.40Up
Eye75 ± 44 of 4 2.00Up
Thoracicoabdominal ganglion5 ± 10 of 4 0.10Down
Salivary gland319 ± 154 of 4 8.44Up
Crop408 ± 124 of 410.80Up
Midgut21 ± 23 of 4 0.60Down
Tubule197 ± 124 of 4 5.20Up
Hindgut194 ± 84 of 4 5.10Up
Heart5 ± 01 of 4 0.15Down
Fat body8 ± 20 of 4 0.22Down
Ovary4 ± 00 of 4 0.10Down
Testis23 ± 14 of 4 0.60None
Male accessory glands202 ± 74 of 4 5.40Up
Virgin spermatheca63 ± 64 of 4 1.69Up
Mated spermatheca99 ± 154 of 4 2.63Up
Adult carcass87 ± 54 of 4 2.30Up
Larval CNS6 ± 10 of 4 0.16Down
Larval Salivary gland215 ± 84 of 4 5.68Up
Larval midgut14 ± 20 of 4 0.39Down
Larval tubule135 ± 34 of 4 3.60Up
Larval hindgut183 ± 74 of 4 4.84Up
Larval fat body1 ± 00 of 4 0.00Down
Larval trachea314 ± 174 of 4 8.31Up
Larval carcass148 ± 134 of 4 3.92Up
S2 cells (growing)1 ± 00 of 4 0.04Down
Whole fly37 ± 54 of 4

Looking for CG10176-RA. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime