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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG10184-RA through 18771 annotations produced 1 hits



(CG10184):

Annotation Number : CG10184
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0039094
Gbrowse : chr3R:19428223-19431209 (-) // 100.0 //
Probeset : 1638132_at
Accessions : protein= NP_651161;, nucleotide= NM_142904;
Interpro : 0003824 // catalytic activity // inferred from electronic annotation /// 0004793 // threonine aldolase activity // infer
FlyMine data for FBgn0039094.
VDRC has 2 RNAi stocks for FBgn0039094 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain45 ± 34 of 4 0.90None
Head93 ± 104 of 4 1.80Up
Eye70 ± 154 of 4 1.34None
Thoracicoabdominal ganglion51 ± 24 of 4 1.00None
Salivary gland179 ± 44 of 4 3.41Up
Crop53 ± 64 of 4 1.00None
Midgut102 ± 54 of 4 2.00Up
Tubule6 ± 10 of 4 0.10Down
Hindgut333 ± 404 of 4 6.40Up
Heart88 ± 74 of 4 1.69Up
Fat body54 ± 214 of 4 1.04None
Ovary52 ± 24 of 4 1.00None
Testis31 ± 44 of 4 0.60Down
Male accessory glands639 ± 924 of 412.20Up
Virgin spermatheca242 ± 314 of 4 4.62Up
Mated spermatheca35 ± 74 of 4 0.67None
Adult carcass87 ± 64 of 4 1.70Up
Larval CNS175 ± 284 of 4 3.35Up
Larval Salivary gland124 ± 94 of 4 2.38Up
Larval midgut31 ± 32 of 4 0.60Down
Larval tubule3 ± 10 of 4 0.10Down
Larval hindgut239 ± 194 of 4 4.56Up
Larval fat body122 ± 234 of 4 2.30None
Larval trachea19 ± 74 of 4 0.37Down
Larval carcass22 ± 22 of 4 0.42Down
S2 cells (growing)14 ± 13 of 4 0.27Down
Whole fly52 ± 24 of 4

Looking for CG10184-RA. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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