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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG10242-RA through 18771 annotations produced 1 hits



Cyp6a23 (Cyp6a23):

Annotation Number : CG10242
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0033978
Gbrowse : chr2R:10763337-10765159 (+) // 100.0 //
Probeset : 1624101_at
Accessions : protein= NP_611000;, nucleotide= NM_137156;
Pathway : 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane //
Interpro : 0004497 // monooxygenase activity // inferred from electronic annotation /// 0005506 // iron ion binding // inferred fro
FlyMine data for FBgn0033978.
Homophila reports that CG10242 is a close match (2e-11) to human gene CYP11B2 (NP_000489), a gene associated with Aldosterone to renin ratio raised (3);Hypoaldosteronism, congenital, due to CMO I deficiency, 203400 (3);Hypoaldosteronism, congenital, due to CMO II deficiency, 610600 (3);{Low renin hypertension, susceptibility to} (3).
BioGrid reports that CG10242 interacts with CG16947 CG8316 .
VDRC has 4 RNAi stocks for FBgn0033978 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain28 14 of 4 0.10Down
Head283 204 of 4 0.80None
Eye118 84 of 4 0.34None
Thoracicoabdominal ganglion23 14 of 4 0.10Down
Salivary gland104 104 of 4 0.30Down
Crop1304 1294 of 4 3.70Up
Midgut3189 2004 of 4 9.10Up
Tubule2894 2464 of 4 8.30Up
Hindgut827 244 of 4 2.40Up
Heart404 64 of 4 1.15None
Fat body784 814 of 4 2.24Up
Ovary30 04 of 4 0.10Down
Testis36 24 of 4 0.10Down
Male accessory glands265 374 of 4 0.80None
Virgin spermatheca1417 1564 of 4 4.04Up
Mated spermatheca1242 414 of 4 3.54Up
Adult carcass397 274 of 4 1.10None
Larval CNS10 93 of 4 0.03Down
Larval Salivary gland50 64 of 4 0.14Down
Larval midgut3277 174 of 4 9.35Up
Larval tubule2153 2104 of 4 6.10Up
Larval hindgut388 164 of 4 1.11None
Larval fat body184 674 of 4 0.50None
Larval trachea188 524 of 4 0.54None
Larval carcass212 154 of 4 0.61None
S2 cells (growing)73 44 of 4 0.21Down
Whole fly350 774 of 4

Looking for CG10242-RA. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime