Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG10275-RA through 18771 annotations produced 1 hits



NG2-like (kon):

Annotation Number : CG10275
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032683
Gbrowse : chr2L:18487745-18496426 (-) // 100.0 //
Probeset : 1625687_at
Accessions : protein= NP_609881;, nucleotide= NM_136037;
Pathway : 0016021 // integral to membrane // non-traceable author statement /// 0051286 // cell tip // inferred from direct assay
Interpro : 0005488 // binding // non-traceable author statement /// 0005515 // protein binding // inferred from physical interactio
FlyMine data for FBgn0032683.
BDGP gene expression has embryonic in situ data for CG10275: 47 pix of staining in 14 body parts.
Homophila reports that CG10275 is a close match (8e-13) to human gene LAMA2;LAMM (NP_001073291), a gene associated with Muscular dystrophy, congenital merosin-deficient, 607855 (3);Muscular dystrophy, congenital, due to partial LAMA2 deficiency, 607855 (3).
TRiP has 1 RNAi stocks for FBgn0032683 available for purchase.
VDRC has 3 RNAi stocks for FBgn0032683 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain57 ± 24 of 4 2.30Up
Head53 ± 54 of 4 2.10Up
Eye69 ± 54 of 4 2.80Up
Thoracicoabdominal ganglion96 ± 54 of 4 3.90Up
Salivary gland29 ± 13 of 4 1.20None
Crop122 ± 44 of 4 4.90Up
Midgut27 ± 14 of 4 1.10None
Tubule64 ± 84 of 4 2.60Up
Hindgut63 ± 24 of 4 2.50Up
Heart67 ± 54 of 4 2.71Up
Fat body17 ± 43 of 4 0.71None
Ovary9 ± 13 of 4 0.40Down
Testis15 ± 14 of 4 0.60Down
Male accessory glands63 ± 84 of 4 2.60Up
Virgin spermatheca33 ± 14 of 4 1.36Up
Mated spermatheca48 ± 64 of 4 1.96Up
Adult carcass57 ± 34 of 4 2.30Up
Larval CNS34 ± 64 of 4 1.40None
Larval Salivary gland26 ± 24 of 4 1.07None
Larval midgut19 ± 33 of 4 0.76None
Larval tubule56 ± 24 of 4 2.20Up
Larval hindgut44 ± 24 of 4 1.77Up
Larval fat body3 ± 10 of 4 0.20Down
Larval trachea20 ± 43 of 4 0.83None
Larval carcass141 ± 144 of 4 5.66Up
S2 cells (growing)24 ± 14 of 4 0.98None
Whole fly25 ± 24 of 4

Looking for CG10275-RA. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime