FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG10279-RG through 18771 annotations produced 1 hits

Lighten up (Rm62):

Annotation Number : CG10279
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0003261
Gbrowse : chr3R:1826561-1828439 (-) // 100.0 //
Probeset : 1623475_s_at
Accessions : protein= NP_001163528; /// NP_524243; /// NP_731031; /// NP_731032; /// NP_731033; /// NP_731034; /// NP_731035; /// NP_731036;, nucleotide= NM_001170057; /// NM_079519; /// NM_169118; /// NM_169119; /// NM_169120; /// NM_169121; /// NM_169122; /// NM_169123;
Pathway : via spliceosome // inferred from mutant phenotype /// 0000398 // nuclear mRNA splicing
Interpro : via spliceosome // inferred by curator /// 0006417 // regulation of translation // inferred from electronic annotation
FlyMine data for FBgn0003261.
BDGP gene expression has embryonic in situ data for Rm62: 4 pix of staining in 1 body parts.
BioGrid reports that CG10279 interacts with CG3779 CG5110 CG7879 CG10279 CG11173 CG1216 CG13155 CG14773 CG3441 CG4394 CG4818 CG5700 CG6147 CG6459 CG7937 CG8092 CG8264 CG8813 CG8843 CG9968 CG6203 CG7439 .
TRiP has 2 RNAi stocks for FBgn0003261 available for purchase.
VDRC has 3 RNAi stocks for FBgn0003261 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	1538 ± 12	4 of 4	1.00	None
Head	1015 ± 58	4 of 4	0.60	Down
Eye	787 ± 18	4 of 4	0.49	Down
Thoracicoabdominal ganglion	1097 ± 41	4 of 4	0.70	Down
Salivary gland	1632 ± 59	4 of 4	1.02	None
Crop	1589 ± 34	4 of 4	1.00	None
Midgut	1236 ± 27	4 of 4	0.80	Down
Tubule	1412 ± 80	4 of 4	0.90	Down
Hindgut	1267 ± 24	4 of 4	0.80	Down
Heart	858 ± 28	4 of 4	0.54	Down
Fat body	1096 ± 121	4 of 4	0.69	Down
Ovary	2335 ± 58	4 of 4	1.50	Up
Testis	530 ± 17	4 of 4	0.30	Down
Male accessory glands	3148 ± 105	4 of 4	2.00	Up
Virgin spermatheca	1032 ± 31	4 of 4	0.65	Down
Mated spermatheca	1101 ± 87	4 of 4	0.69	Down
Adult carcass	1027 ± 37	4 of 4	0.60	Down
Larval CNS	1659 ± 83	4 of 4	1.04	None
Larval Salivary gland	1656 ± 44	4 of 4	1.04	None
Larval midgut	1042 ± 22	4 of 4	0.65	Down
Larval tubule	890 ± 31	4 of 4	0.60	Down
Larval hindgut	1357 ± 56	4 of 4	0.85	Down
Larval fat body	1075 ± 64	4 of 4	0.70	Down
Larval trachea	2463 ± 234	4 of 4	1.54	Up
Larval carcass	1534 ± 73	4 of 4	0.96	None
S2 cells (growing)	2438 ± 36	4 of 4	1.53	Up
Whole fly	1598 ± 29	4 of 4

Looking for CG10279-RG. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720