Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG10324-RA through 18771 annotations produced 1 hits



(CG10324):

Annotation Number : CG10324
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0038454
Gbrowse : chr3R:12470597-12472711 (-) // 100.0 //
Probeset : 1640267_at
Accessions : protein= NP_650571;, nucleotide= NM_142314;
Pathway : 0005622 // intracellular // inferred from electronic annotation
Interpro : 0003676 // nucleic acid binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from p
FlyMine data for FBgn0038454.
BDGP gene expression has embryonic in situ data for CG10324: 4 pix of staining in 1 body parts.
BioGrid reports that CG10324 interacts with CG10689 CG11266 CG11274 CG3019 CG31211 CG4602 CG5808 CG6340 CG6843 CG12877 CG2199 .
VDRC has 3 RNAi stocks for FBgn0038454 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain102 ± 24 of 4 1.70Up
Head53 ± 74 of 4 0.90None
Eye50 ± 34 of 4 0.83None
Thoracicoabdominal ganglion139 ± 124 of 4 2.30Up
Salivary gland78 ± 60 of 4 1.30None
Crop85 ± 44 of 4 1.40Up
Midgut45 ± 30 of 4 0.80None
Tubule62 ± 34 of 4 1.00None
Hindgut57 ± 14 of 4 1.00None
Heart43 ± 24 of 4 0.72None
Fat body38 ± 53 of 4 0.63None
Ovary143 ± 44 of 4 2.40Up
Testis71 ± 64 of 4 1.20None
Male accessory glands53 ± 04 of 4 0.90None
Virgin spermatheca45 ± 34 of 4 0.75None
Mated spermatheca55 ± 24 of 4 0.92None
Adult carcass33 ± 20 of 4 0.50Down
Larval CNS185 ± 74 of 4 3.07Up
Larval Salivary gland87 ± 64 of 4 1.44Up
Larval midgut36 ± 44 of 4 0.61Down
Larval tubule92 ± 44 of 4 1.50Up
Larval hindgut32 ± 24 of 4 0.54Down
Larval fat body61 ± 73 of 4 1.00None
Larval trachea49 ± 24 of 4 0.82None
Larval carcass39 ± 32 of 4 0.65None
S2 cells (growing)53 ± 24 of 4 0.88None
Whole fly60 ± 74 of 4

Looking for CG10324-RA. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime