Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG10348-RA through 18771 annotations produced 1 hits



(CG10348):

Annotation Number : CG10348
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032707
Gbrowse : chr2L:18714829-18716422 (-) // 100.0 //
Probeset : 1626496_at
Accessions : protein= NP_609904;, nucleotide= NM_136060;
Pathway : 0005622 // intracellular // inferred from electronic annotation
Interpro : 0003676 // nucleic acid binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from
FlyMine data for FBgn0032707.
Homophila reports that CG10348 is a close match (2e-11) to human gene WT1 (NP_077742), a gene associated with Denys-Drash syndrome, 194080 (3);Frasier syndrome, 136680 (3);Mesangial sclerosis, isolated diffuse, 256370 (3);WAGR syndrome, 194072 (3);Wilms tumor, type 1, 194070 (3).
BioGrid reports that CG10348 interacts with CG2944 CG4168 CG7583 CG9902 .
TRiP has 1 RNAi stocks for FBgn0032707 available for purchase.
VDRC has 3 RNAi stocks for FBgn0032707 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain4 20 of 4 1.10None
Head14 22 of 4 4.20Up
Eye13 14 of 4 3.71Up
Thoracicoabdominal ganglion1 10 of 4 0.50None
Salivary gland5 30 of 4 1.66None
Crop3 10 of 4 1.00None
Midgut1 10 of 4 0.50None
Tubule2 10 of 4 0.70None
Hindgut3 10 of 4 1.00None
Heart2 10 of 4 0.82None
Fat body3 20 of 4 0.92None
Ovary1 00 of 4 0.30None
Testis52 24 of 414.80Up
Male accessory glands5 20 of 4 1.40None
Virgin spermatheca3 00 of 4 0.89None
Mated spermatheca2 10 of 4 0.79None
Adult carcass15 31 of 4 4.50Up
Larval CNS2 20 of 4 0.67None
Larval Salivary gland9 21 of 4 2.78None
Larval midgut3 20 of 4 1.05None
Larval tubule2 00 of 4 0.70None
Larval hindgut3 10 of 4 0.86None
Larval fat body10 71 of 4 3.10None
Larval trachea10 13 of 4 2.86Up
Larval carcass2 00 of 4 0.74None
S2 cells (growing)1 00 of 4 0.37None
Whole fly3 10 of 4

Looking for CG10348-RA. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime