FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG10393-RA through 18771 annotations produced 1 hits

Rough eye (amos):

Annotation Number : CG10393
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0003270
Gbrowse : chr2L:18596046-18597200 (-) // 100.0 //
Probeset : 1636062_at
Accessions : protein= NP_477446;, nucleotide= NM_058098;
Pathway : DNA-dependent // inferred from sequence or structural similarity /// 0007275 // multicellular organismal development //
Interpro : 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic
FlyMine data for FBgn0003270.
BioGrid reports that CG10393 interacts with CG30417 CG3096 CG5102 CG5102 CG5102 CG3619 CG1897 CG1007 CG1007 CG8365 CG6494 CG5460 CG1689 CG6348 CG6348 CG3936 CG7508 CG7508 CG4637 CG4637 .
VDRC has 2 RNAi stocks for FBgn0003270 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	3 ± 1	1 of 4	0.90	None
Head	3 ± 1	0 of 4	0.80	None
Eye	2 ± 1	0 of 4	0.66	None
Thoracicoabdominal ganglion	3 ± 0	0 of 4	0.70	None
Salivary gland	16 ± 3	0 of 4	3.85	None
Crop	5 ± 1	0 of 4	1.40	None
Midgut	10 ± 1	0 of 4	2.50	Up
Tubule	5 ± 0	0 of 4	1.40	Up
Hindgut	4 ± 1	0 of 4	1.10	None
Heart	1 ± 0	0 of 4	0.33	Down
Fat body	6 ± 4	0 of 4	1.44	None
Ovary	2 ± 1	0 of 4	0.60	None
Testis	1 ± 1	0 of 4	0.50	None
Male accessory glands	12 ± 3	1 of 4	2.90	None
Virgin spermatheca	7 ± 2	0 of 4	1.71	None
Mated spermatheca	4 ± 1	0 of 4	1.04	None
Adult carcass	6 ± 2	0 of 4	1.50	None
Larval CNS	4 ± 2	0 of 4	1.10	None
Larval Salivary gland	3 ± 1	0 of 4	0.75	None
Larval midgut	7 ± 2	0 of 4	1.72	None
Larval tubule	3 ± 0	0 of 4	0.90	None
Larval hindgut	6 ± 2	0 of 4	1.58	None
Larval fat body	4 ± 0	0 of 4	0.90	None
Larval trachea	2 ± 2	0 of 4	0.69	None
Larval carcass	6 ± 1	0 of 4	1.56	None
S2 cells (growing)	4 ± 0	0 of 4	1.05	None
Whole fly	4 ± 0	0 of 4

Looking for CG10393-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720