FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG10399-RA through 18771 annotations produced 1 hits

(CG10399):

Annotation Number : CG10399
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0031877
Gbrowse : chr2L:6960442-6961473 (+) // 100.0 //
Probeset : 1633760_at
Accessions : protein= NP_609089;, nucleotide= NM_135245;
Pathway : 0005759 // mitochondrial matrix // inferred from sequence or structural similarity /// 0005875 // microtubule associated
Interpro : 0003824 // catalytic activity // inferred from electronic annotation /// 0004419 // hydroxymethylglutaryl-CoA lyase acti
FlyMine data for FBgn0031877.
Homophila reports that CG10399 is a close match (1e-99) to human gene HMGCL (NP_000182), a gene associated with HMG-CoA lyase deficiency (3).
VDRC has 3 RNAi stocks for FBgn0031877 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	17 ± 1	4 of 4	0.20	Down
Head	69 ± 7	4 of 4	0.90	None
Eye	48 ± 4	4 of 4	0.63	Down
Thoracicoabdominal ganglion	21 ± 2	4 of 4	0.30	Down
Salivary gland	64 ± 5	4 of 4	0.85	None
Crop	33 ± 2	4 of 4	0.40	Down
Midgut	82 ± 2	4 of 4	1.10	None
Tubule	325 ± 29	4 of 4	4.30	Up
Hindgut	76 ± 3	4 of 4	1.00	None
Heart	121 ± 4	4 of 4	1.60	Up
Fat body	150 ± 29	4 of 4	1.99	Up
Ovary	70 ± 4	4 of 4	0.90	None
Testis	10 ± 0	4 of 4	0.10	Down
Male accessory glands	28 ± 3	4 of 4	0.40	Down
Virgin spermatheca	137 ± 5	4 of 4	1.81	Up
Mated spermatheca	102 ± 6	4 of 4	1.35	Up
Adult carcass	89 ± 5	4 of 4	1.20	None
Larval CNS	36 ± 4	4 of 4	0.49	Down
Larval Salivary gland	178 ± 10	4 of 4	2.35	Up
Larval midgut	70 ± 2	4 of 4	0.93	None
Larval tubule	55 ± 1	4 of 4	0.70	Down
Larval hindgut	120 ± 6	4 of 4	1.58	Up
Larval fat body	59 ± 7	4 of 4	0.80	None
Larval trachea	97 ± 15	4 of 4	1.29	None
Larval carcass	90 ± 9	4 of 4	1.20	None
S2 cells (growing)	43 ± 1	4 of 4	0.57	Down
Whole fly	76 ± 1	4 of 4

Looking for CG10399-RA. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720