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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG10522-RA through 18771 annotations produced 1 hits



sticky (sti):

Annotation Number : CG10522
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0002466
Gbrowse : chr3L:12501089-12507889 (-) // 100.0 //
Probeset : 1637424_at
Accessions : protein= NP_648584;, nucleotide= NM_140327;
Pathway : actomyosin contractile ring assembly // inferred from mutant phenotype /// 0006325 // chromatin organization // inferre
Interpro : completion of separation // inferred from mutant phenotype /// 0023034 // intracellular signaling pathway // inferred f
FlyMine data for FBgn0002466.
Homophila reports that CG10522 is a close match (5e-11) to human gene MYH8 (NP_002463), a gene associated with Carney complex variant, 608837 (3);Trismus-pseudocamptodactyly syndrome, 158300 (3).
BioGrid reports that CG10522 interacts with CG15715 CG4795 .
TRiP has 1 RNAi stocks for FBgn0002466 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain1 ± 00 of 4 0.00Down
Head4 ± 11 of 4 0.10Down
Eye2 ± 00 of 4 0.04Down
Thoracicoabdominal ganglion6 ± 11 of 4 0.10Down
Salivary gland8 ± 30 of 4 0.14Down
Crop3 ± 10 of 4 0.10Down
Midgut7 ± 00 of 4 0.10Down
Tubule3 ± 00 of 4 0.10Down
Hindgut1 ± 00 of 4 0.00Down
Heart3 ± 00 of 4 0.06Down
Fat body6 ± 31 of 4 0.10Down
Ovary252 ± 114 of 4 4.20Up
Testis57 ± 34 of 4 0.90None
Male accessory glands1 ± 00 of 4 0.00Down
Virgin spermatheca3 ± 10 of 4 0.05Down
Mated spermatheca4 ± 10 of 4 0.07Down
Adult carcass10 ± 21 of 4 0.20Down
Larval CNS427 ± 254 of 4 7.04Up
Larval Salivary gland10 ± 02 of 4 0.17Down
Larval midgut19 ± 12 of 4 0.32Down
Larval tubule3 ± 00 of 4 0.10Down
Larval hindgut16 ± 04 of 4 0.27Down
Larval fat body23 ± 23 of 4 0.40Down
Larval trachea58 ± 34 of 4 0.96None
Larval carcass38 ± 14 of 4 0.63Down
S2 cells (growing)245 ± 84 of 4 4.04Up
Whole fly60 ± 24 of 4

Looking for CG10522-RA. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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