FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG10542-RA through 18771 annotations produced 1 hits

lethal (3) 01640 (Bre1):

Annotation Number : CG10542
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0086694
Gbrowse : chr3L:5783273-5787291 (-) // 100.0 //
Probeset : 1624301_at
Accessions : protein= NP_647989;, nucleotide= NM_139732;
Pathway : engulfment // inferred from mutant phenotype /// 0007219 // Notch signaling pathway // inferred from electronic annotat
Interpro : 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation
FlyMine data for FBgn0086694.
BioGrid reports that CG10542 interacts with CG10653 CG18734 CG9040 .
TRiP has 3 RNAi stocks for FBgn0086694 available for purchase.
VDRC has 2 RNAi stocks for FBgn0086694 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	194 ± 6	4 of 4	1.40	Up
Head	73 ± 2	4 of 4	0.50	Down
Eye	88 ± 3	4 of 4	0.63	Down
Thoracicoabdominal ganglion	159 ± 3	4 of 4	1.10	None
Salivary gland	111 ± 6	4 of 4	0.79	None
Crop	70 ± 2	4 of 4	0.50	Down
Midgut	65 ± 2	4 of 4	0.50	Down
Tubule	76 ± 5	4 of 4	0.50	Down
Hindgut	62 ± 3	4 of 4	0.40	Down
Heart	51 ± 5	4 of 4	0.37	Down
Fat body	54 ± 3	4 of 4	0.39	Down
Ovary	363 ± 10	4 of 4	2.60	Up
Testis	37 ± 1	4 of 4	0.30	Down
Male accessory glands	112 ± 9	4 of 4	0.80	None
Virgin spermatheca	66 ± 1	4 of 4	0.47	Down
Mated spermatheca	78 ± 4	4 of 4	0.56	Down
Adult carcass	58 ± 2	4 of 4	0.40	Down
Larval CNS	266 ± 4	4 of 4	1.90	Up
Larval Salivary gland	147 ± 2	4 of 4	1.05	None
Larval midgut	67 ± 2	4 of 4	0.48	Down
Larval tubule	70 ± 3	4 of 4	0.50	Down
Larval hindgut	82 ± 0	4 of 4	0.58	Down
Larval fat body	66 ± 3	4 of 4	0.50	Down
Larval trachea	168 ± 6	4 of 4	1.20	None
Larval carcass	90 ± 4	4 of 4	0.64	Down
S2 cells (growing)	188 ± 4	4 of 4	1.34	Up
Whole fly	140 ± 13	4 of 4

Looking for CG10542-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720