FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG10596-RA through 18771 annotations produced 1 hits

Engrailed nuclear homeoprotein-regulated gene (Msr-110):

Annotation Number : CG10596
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0015766
Gbrowse : chr3L:5560000-5570448 (-) // 100.0 //
Probeset : 1635635_a_at
Accessions : protein= NP_647973; /// NP_729077; /// NP_729078;, nucleotide= NM_139716; /// NM_168123; /// NM_168124;
FlyMine data for FBgn0015766.
BDGP gene expression has embryonic in situ data for Msr-110: 43 pix of staining in 11 body parts.
BioGrid reports that CG10596 interacts with CG11380 CG13907 .
VDRC has 2 RNAi stocks for FBgn0015766 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	2377 ± 52	4 of 4	1.50	Up
Head	3543 ± 176	4 of 4	2.20	Up
Eye	2330 ± 89	4 of 4	1.43	Up
Thoracicoabdominal ganglion	2540 ± 51	4 of 4	1.60	Up
Salivary gland	1229 ± 89	4 of 4	0.76	None
Crop	4464 ± 275	4 of 4	2.70	Up
Midgut	460 ± 22	4 of 4	0.30	Down
Tubule	210 ± 54	4 of 4	0.10	Down
Hindgut	4582 ± 143	4 of 4	2.80	Up
Heart	286 ± 20	4 of 4	0.18	Down
Fat body	588 ± 125	4 of 4	0.36	Down
Ovary	247 ± 26	4 of 4	0.20	Down
Testis	1303 ± 69	4 of 4	0.80	None
Male accessory glands	8442 ± 177	4 of 4	5.20	Up
Virgin spermatheca	3592 ± 35	4 of 4	2.21	Up
Mated spermatheca	3802 ± 231	4 of 4	2.34	Up
Adult carcass	2806 ± 86	4 of 4	1.70	Up
Larval CNS	1403 ± 90	4 of 4	0.86	None
Larval Salivary gland	211 ± 24	4 of 4	0.13	Down
Larval midgut	486 ± 25	4 of 4	0.30	Down
Larval tubule	46 ± 9	4 of 4	0.00	Down
Larval hindgut	5520 ± 64	4 of 4	3.39	Up
Larval fat body	1008 ± 167	4 of 4	0.60	Down
Larval trachea	3165 ± 152	4 of 4	1.94	Up
Larval carcass	3145 ± 163	4 of 4	1.93	Up
S2 cells (growing)	2720 ± 120	4 of 4	1.67	Up
Whole fly	1628 ± 139	4 of 4

Looking for CG10596-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720