Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG10631-RA through 18771 annotations produced 1 hits



(CG10631):

Annotation Number : CG10631
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032817
Gbrowse : chr2L:19742813-19756867 (-) // 100.0 //
Probeset : 1623968_at
Accessions : protein= NP_609998;, nucleotide= NM_136154;
Pathway : 0005622 // intracellular // inferred from electronic annotation
Interpro : 0003676 // nucleic acid binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from
FlyMine data for FBgn0032817.
BDGP gene expression has embryonic in situ data for CG10631: 8 pix of staining in 8 body parts.
BioGrid reports that CG10631 interacts with CG12391 Dmel CG34365 .
TRiP has 1 RNAi stocks for FBgn0032817 available for purchase.
VDRC has 3 RNAi stocks for FBgn0032817 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain379 ± 134 of 4 5.50Up
Head97 ± 34 of 4 1.40Up
Eye125 ± 84 of 4 1.80Up
Thoracicoabdominal ganglion302 ± 74 of 4 4.40Up
Salivary gland170 ± 24 of 4 2.45Up
Crop114 ± 44 of 4 1.60Up
Midgut53 ± 24 of 4 0.80Down
Tubule74 ± 34 of 4 1.10None
Hindgut95 ± 44 of 4 1.40Up
Heart104 ± 54 of 4 1.51Up
Fat body62 ± 74 of 4 0.90None
Ovary217 ± 54 of 4 3.10Up
Testis58 ± 24 of 4 0.80None
Male accessory glands83 ± 64 of 4 1.20None
Virgin spermatheca88 ± 24 of 4 1.27Up
Mated spermatheca90 ± 64 of 4 1.30Up
Adult carcass81 ± 34 of 4 1.20None
Larval CNS285 ± 114 of 4 4.11Up
Larval Salivary gland119 ± 54 of 4 1.72Up
Larval midgut52 ± 14 of 4 0.76Down
Larval tubule83 ± 44 of 4 1.20None
Larval hindgut185 ± 94 of 4 2.67Up
Larval fat body40 ± 24 of 4 0.60Down
Larval trachea137 ± 134 of 4 1.97Up
Larval carcass133 ± 54 of 4 1.92Up
S2 cells (growing)132 ± 34 of 4 1.90Up
Whole fly69 ± 44 of 4

Looking for CG10631-RA. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime