FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG10653-RA through 18771 annotations produced 1 hits

hook (hk):

Annotation Number : CG10653
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0001202
Gbrowse : chr2L:19030837-19033495 (-) // 100.0 //
Probeset : 1628673_at
Accessions : protein= NP_476573;, nucleotide= NM_057225;
Pathway : engulfment // inferred from mutant phenotype /// 0007275 // multicellular organismal development // inferred from elect
Interpro : 0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /
FlyMine data for FBgn0001202.
BDGP gene expression has embryonic in situ data for hk: 8 pix of staining in 1 body parts.
BioGrid reports that CG10653 interacts with CG15071 CG11990 CG14247 CG14556 CG16719 CG1783 CG3052 CG3504 CG3610 CG4697 CG5390 CG5522 CG7386 CG8104 CG8383 CG3563 Dmel CG34365 .
VDRC has 2 RNAi stocks for FBgn0001202 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	537 ± 13	4 of 4	4.70	Up
Head	259 ± 2	4 of 4	2.30	Up
Eye	443 ± 12	4 of 4	3.88	Up
Thoracicoabdominal ganglion	596 ± 22	4 of 4	5.20	Up
Salivary gland	225 ± 15	4 of 4	1.97	Up
Crop	143 ± 2	4 of 4	1.30	Up
Midgut	120 ± 4	4 of 4	1.10	None
Tubule	207 ± 6	4 of 4	1.80	Up
Hindgut	160 ± 6	4 of 4	1.40	Up
Heart	126 ± 6	4 of 4	1.10	None
Fat body	79 ± 12	4 of 4	0.69	Down
Ovary	204 ± 4	4 of 4	1.80	Up
Testis	70 ± 2	4 of 4	0.60	Down
Male accessory glands	121 ± 5	4 of 4	1.10	None
Virgin spermatheca	175 ± 5	4 of 4	1.53	Up
Mated spermatheca	169 ± 4	4 of 4	1.48	Up
Adult carcass	105 ± 9	4 of 4	0.90	None
Larval CNS	175 ± 9	4 of 4	1.53	Up
Larval Salivary gland	191 ± 9	4 of 4	1.68	Up
Larval midgut	135 ± 5	4 of 4	1.18	Up
Larval tubule	182 ± 4	4 of 4	1.60	Up
Larval hindgut	120 ± 8	4 of 4	1.05	None
Larval fat body	107 ± 8	4 of 4	0.90	None
Larval trachea	146 ± 8	4 of 4	1.28	Up
Larval carcass	105 ± 7	4 of 4	0.92	None
S2 cells (growing)	194 ± 2	4 of 4	1.70	Up
Whole fly	114 ± 1	4 of 4

Looking for CG10653-RA. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720