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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG10701-RD through 18771 annotations produced 1 hits



Moesin (Moe):

Annotation Number : CG10701
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0011661
Gbrowse : chrX:8767641-8785834 (-) // 99.75 //
Probeset : 1633074_a_at
Accessions : protein= NP_525082; /// NP_727290; /// NP_727291; /// NP_727292; /// NP_996387; /// NP_996388; /// NP_996389; /// NP_996390; /// NP_996391; /// NP_996392;, nucleotide= NM_080343; /// NM_167168; /// NM_167169; /// NM_167170; /// NM_206664; /// NM_206665; /// NM_206666; /// NM_206667; /// NM_206668; /// NM_206669;
Pathway : 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // c
Interpro : 0003779 // actin binding // non-traceable author statement /// 0003779 // actin binding // inferred from direct assay //
FlyMine data for FBgn0011661.
BDGP gene expression has embryonic in situ data for Moe: 51 pix of staining in 19 body parts.
Homophila reports that CG10701 is a close match (4e-13) to human gene FRMD7 (NP_919253), a gene associated with Nystagmus 1, congenital, X-linked, 310700 (3).
BioGrid reports that CG10701 interacts with CG11322 CG32654 CG18361 CG15792 CG8416 CG9774 .
TRiP has 3 RNAi stocks for FBgn0011661 available for purchase.
VDRC has 2 RNAi stocks for FBgn0011661 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain987 204 of 4 0.90None
Head1583 524 of 4 1.50Up
Eye4454 1114 of 4 4.28Up
Thoracicoabdominal ganglion1238 444 of 4 1.20Up
Salivary gland3377 2424 of 4 3.25Up
Crop2455 814 of 4 2.40Up
Midgut2033 424 of 4 2.00Up
Tubule2299 1654 of 4 2.20Up
Hindgut2291 144 of 4 2.20Up
Heart1424 374 of 4 1.37Up
Fat body640 1254 of 4 0.62Down
Ovary1176 184 of 4 1.10Up
Testis260 134 of 4 0.30Down
Male accessory glands2573 1324 of 4 2.50Up
Virgin spermatheca1131 244 of 4 1.09Up
Mated spermatheca1321 664 of 4 1.27Up
Adult carcass954 644 of 4 0.90None
Larval CNS1295 964 of 4 1.25Up
Larval Salivary gland4284 1264 of 4 4.12Up
Larval midgut2647 2164 of 4 2.55Up
Larval tubule2534 234 of 4 2.40Up
Larval hindgut2839 414 of 4 2.73Up
Larval fat body833 774 of 4 0.80None
Larval trachea3858 1294 of 4 3.71Up
Larval carcass1758 1004 of 4 1.69Up
S2 cells (growing)2762 694 of 4 2.66Up
Whole fly1040 264 of 4

Looking for CG10701-RD. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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