FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG10726-RA through 18771 annotations produced 1 hits

barren (barr):

Annotation Number : CG10726
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0014127
Gbrowse : chr2L:20058163-20060975 (-) // 100.0 //
Probeset : 1627999_s_at
Accessions : protein= NP_477106; /// NP_724240;, nucleotide= NM_057758; /// NM_165317;
Pathway : 0000796 // condensin complex // inferred from sequence or structural similarity /// 0000796 // condensin complex // non-
FlyMine data for FBgn0014127.
BDGP gene expression has embryonic in situ data for barr: 14 pix of staining in 6 body parts.
BioGrid reports that CG10726 interacts with CG5890 CG6544 CG11648 CG2759 .
TRiP has 2 RNAi stocks for FBgn0014127 available for purchase.
VDRC has 3 RNAi stocks for FBgn0014127 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	54 ± 2	4 of 4	0.20	Down
Head	48 ± 1	4 of 4	0.20	Down
Eye	31 ± 2	4 of 4	0.12	Down
Thoracicoabdominal ganglion	55 ± 2	4 of 4	0.20	Down
Salivary gland	58 ± 2	4 of 4	0.23	Down
Crop	71 ± 5	4 of 4	0.30	Down
Midgut	45 ± 3	4 of 4	0.20	Down
Tubule	52 ± 2	3 of 4	0.20	Down
Hindgut	60 ± 3	4 of 4	0.20	Down
Heart	27 ± 1	4 of 4	0.11	Down
Fat body	35 ± 5	3 of 4	0.14	Down
Ovary	545 ± 9	4 of 4	2.10	Up
Testis	348 ± 5	4 of 4	1.40	Up
Male accessory glands	53 ± 2	4 of 4	0.20	Down
Virgin spermatheca	45 ± 5	4 of 4	0.18	Down
Mated spermatheca	45 ± 2	4 of 4	0.18	Down
Adult carcass	45 ± 1	3 of 4	0.20	Down
Larval CNS	392 ± 16	4 of 4	1.53	Up
Larval Salivary gland	35 ± 4	3 of 4	0.14	Down
Larval midgut	28 ± 2	4 of 4	0.11	Down
Larval tubule	40 ± 2	4 of 4	0.20	Down
Larval hindgut	44 ± 3	4 of 4	0.17	Down
Larval fat body	109 ± 32	4 of 4	0.40	Down
Larval trachea	92 ± 8	4 of 4	0.36	Down
Larval carcass	48 ± 3	4 of 4	0.19	Down
S2 cells (growing)	203 ± 4	4 of 4	0.79	Down
Whole fly	256 ± 6	4 of 4

Looking for CG10726-RA. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720