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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG10763-RA through 18771 annotations produced 1 hits



Gbeta5 (Gbeta5):

Annotation Number : CG10763
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0030011
Gbrowse : chrX:8044750-8046311 (-) // 100.0 //
Probeset : 1625454_at
Accessions : protein= NP_572452;, nucleotide= NM_132224;
Pathway : 0005834 // heterotrimeric G-protein complex // inferred from sequence or structural similarity /// 0005834 // heterotrim
Interpro : 0003924 // GTPase activity // inferred from sequence or structural similarity
FlyMine data for FBgn0030011.
BDGP gene expression has embryonic in situ data for Gbeta5: 13 pix of staining in 5 body parts.
Homophila reports that CG10763 is a close match (4e-15) to human gene PEX7;RCDP1 (NP_000279), a gene associated with Refsum disease, 266500 (3);Rhizomelic chondrodysplasia punctata, type 1, 215100 (3).
TRiP has 1 RNAi stocks for FBgn0030011 available for purchase.
VDRC has 1 RNAi stocks for FBgn0030011 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain748 ± 114 of 417.10Up
Head224 ± 164 of 4 5.10Up
Eye192 ± 94 of 4 4.41Up
Thoracicoabdominal ganglion547 ± 64 of 412.50Up
Salivary gland8 ± 20 of 4 0.20Down
Crop118 ± 14 of 4 2.70Up
Midgut24 ± 11 of 4 0.60Down
Tubule7 ± 10 of 4 0.20Down
Hindgut46 ± 34 of 4 1.10None
Heart48 ± 14 of 4 1.11None
Fat body9 ± 40 of 4 0.22Down
Ovary24 ± 24 of 4 0.60Down
Testis30 ± 04 of 4 0.70Down
Male accessory glands38 ± 11 of 4 0.90None
Virgin spermatheca5 ± 10 of 4 0.11Down
Mated spermatheca5 ± 20 of 4 0.14Down
Adult carcass25 ± 22 of 4 0.60Down
Larval CNS285 ± 504 of 4 6.55Up
Larval Salivary gland10 ± 10 of 4 0.24Down
Larval midgut14 ± 10 of 4 0.32Down
Larval tubule4 ± 10 of 4 0.10Down
Larval hindgut38 ± 24 of 4 0.89None
Larval fat body15 ± 40 of 4 0.40Down
Larval trachea5 ± 31 of 4 0.13Down
Larval carcass10 ± 10 of 4 0.25Down
S2 cells (growing)5 ± 10 of 4 0.12Down
Whole fly43 ± 24 of 4

Looking for CG10763-RA. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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