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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG10772-RB through 18771 annotations produced 1 hits



Furin-like protease (Fur1):

Annotation Number : CG10772
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0004509
Gbrowse : chr3R:21177465-21298778 (-) // 100.0 //
Probeset : 1628952_s_at
Accessions : protein= NP_524885; /// NP_733102; /// NP_733103; /// NP_733104; /// NP_996293; /// NP_996294;, nucleotide= NM_080146; /// NM_170654; /// NM_170655; /// NM_170656; /// NM_206570; /// NM_206571;
Pathway : 0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electro
Interpro : 0004252 // serine-type endopeptidase activity // inferred from direct assay /// 0004252 // serine-type endopeptidase act
FlyMine data for FBgn0004509.
Homophila reports that CG10772 is a close match (5e-153) to human gene BMIQ12;NEC1;PC1;PC3;PCSK1 (NP_000430), a gene associated with Obesity with impaired prohormone processing, 600955 (3);{Obesity, susceptiblity to, BMIQ12}, 612362 (3).
TRiP has 2 RNAi stocks for FBgn0004509 available for purchase.
VDRC has 1 RNAi stocks for FBgn0004509 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain342 ± 194 of 4 3.10Up
Head206 ± 64 of 4 1.90Up
Eye202 ± 124 of 4 1.87Up
Thoracicoabdominal ganglion282 ± 124 of 4 2.60Up
Salivary gland86 ± 82 of 4 0.79None
Crop198 ± 74 of 4 1.80Up
Midgut125 ± 104 of 4 1.20None
Tubule480 ± 154 of 4 4.40Up
Hindgut257 ± 94 of 4 2.40Up
Heart174 ± 24 of 4 1.61Up
Fat body103 ± 74 of 4 0.95None
Ovary122 ± 54 of 4 1.10None
Testis53 ± 14 of 4 0.50Down
Male accessory glands35 ± 21 of 4 0.30Down
Virgin spermatheca77 ± 34 of 4 0.72None
Mated spermatheca79 ± 44 of 4 0.73None
Adult carcass142 ± 114 of 4 1.30None
Larval CNS119 ± 124 of 4 1.10None
Larval Salivary gland4 ± 10 of 4 0.04Down
Larval midgut107 ± 43 of 4 0.99None
Larval tubule338 ± 184 of 4 3.10Up
Larval hindgut177 ± 64 of 4 1.63Up
Larval fat body174 ± 244 of 4 1.60None
Larval trachea112 ± 114 of 4 1.04None
Larval carcass119 ± 64 of 4 1.10None
S2 cells (growing)155 ± 54 of 4 1.43Up
Whole fly108 ± 104 of 4

Looking for CG10772-RB. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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