Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG10795-RA through 18771 annotations produced 1 hits



(CG10795):

Annotation Number : CG10795
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0034626
Gbrowse : chr2R:17270731-17271846 (-) // 100.0 //
Probeset : 1639094_at
Accessions : protein= NP_611583;, nucleotide= NM_137739;
Pathway : 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electron
FlyMine data for FBgn0034626.
VDRC has 2 RNAi stocks for FBgn0034626 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain152 ± 34 of 4 1.10None
Head138 ± 54 of 4 1.00None
Eye190 ± 54 of 4 1.38Up
Thoracicoabdominal ganglion132 ± 94 of 4 1.00None
Salivary gland144 ± 114 of 4 1.05None
Crop146 ± 124 of 4 1.10None
Midgut145 ± 94 of 4 1.10None
Tubule101 ± 74 of 4 0.70Down
Hindgut84 ± 04 of 4 0.60Down
Heart146 ± 64 of 4 1.07None
Fat body105 ± 54 of 4 0.77None
Ovary322 ± 114 of 4 2.30Up
Testis71 ± 54 of 4 0.50Down
Male accessory glands165 ± 44 of 4 1.20None
Virgin spermatheca146 ± 24 of 4 1.06None
Mated spermatheca177 ± 34 of 4 1.29None
Adult carcass104 ± 124 of 4 0.80None
Larval CNS92 ± 54 of 4 0.68None
Larval Salivary gland214 ± 94 of 4 1.56Up
Larval midgut84 ± 24 of 4 0.61Down
Larval tubule113 ± 44 of 4 0.80None
Larval hindgut72 ± 44 of 4 0.53Down
Larval fat body146 ± 94 of 4 1.10None
Larval trachea157 ± 94 of 4 1.14None
Larval carcass104 ± 74 of 4 0.76None
S2 cells (growing)358 ± 84 of 4 2.60Up
Whole fly137 ± 154 of 4

Looking for CG10795-RA. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime