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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG10810-RA through 18771 annotations produced 1 hits



drosomycin (Drs):

Annotation Number : CG10810
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0010381
Gbrowse : chr3L:3369568-3369944 (+) // 100.0 //
Probeset : 1635189_at
Accessions : protein= NP_523901;, nucleotide= NM_079177;
Pathway : 0005576 // extracellular region // inferred from direct assay /// 0005576 // extracellular region // inferred from elect
FlyMine data for FBgn0010381.
BDGP gene expression has embryonic in situ data for Drs: 4 pix of staining in 1 body parts.
VDRC has 1 RNAi stocks for FBgn0010381 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain64 ± 54 of 4 0.00Down
Head935 ± 3514 of 4 0.50Down
Eye432 ± 2624 of 4 0.22Down
Thoracicoabdominal ganglion54 ± 74 of 4 0.00Down
Salivary gland9536 ± 6234 of 4 4.77Up
Crop234 ± 164 of 4 0.10Down
Midgut23 ± 53 of 4 0.00Down
Tubule495 ± 1624 of 4 0.20Down
Hindgut40 ± 163 of 4 0.00Down
Heart690 ± 604 of 4 0.35Down
Fat body1456 ± 15914 of 4 0.73None
Ovary134 ± 543 of 4 0.10Down
Testis9 ± 13 of 4 0.00Down
Male accessory glands10 ± 11 of 4 0.00Down
Virgin spermatheca4902 ± 1884 of 4 2.45Up
Mated spermatheca5279 ± 2144 of 4 2.64Up
Adult carcass1155 ± 2224 of 4 0.60Down
Larval CNS2 ± 10 of 4 0.00Down
Larval Salivary gland114 ± 484 of 4 0.06Down
Larval midgut48 ± 44 of 4 0.02Down
Larval tubule25 ± 83 of 4 0.00Down
Larval hindgut85 ± 214 of 4 0.04Down
Larval fat body4593 ± 4014 of 4 2.30Up
Larval trachea737 ± 6614 of 4 0.37Down
Larval carcass84 ± 224 of 4 0.04Down
S2 cells (growing)287 ± 444 of 4 0.14Down
Whole fly1998 ± 1464 of 4

Looking for CG10810-RA. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime