FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG10837-RE through 18771 annotations produced 3 hits

Eukaryotic initiation factor 4B (eIF-4B):

Annotation Number : CG10837
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0020660
Gbrowse : chr2RHet:2901815-2902500 (+) // 100.0 //
Probeset : 1629261_at
Accessions : protein= NP_001015319; /// NP_001015320; /// NP_001015321; /// NP_001015322;, nucleotide= NM_001015319; /// NM_001015320; /// NM_001015321; /// NM_001015322;
Pathway : 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // inferred from physical interaction /// 000582
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred fro
FlyMine data for FBgn0020660.
BioGrid reports that CG10837 interacts with CG31999 CG4059 .
VDRC has 1 RNAi stocks for FBgn0020660 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	12 ± 0	4 of 4	3.10	Up
Head	6 ± 1	3 of 4	1.70	None
Eye	11 ± 1	3 of 4	2.91	Up
Thoracicoabdominal ganglion	8 ± 0	4 of 4	2.20	None
Salivary gland	48 ± 8	4 of 4	12.05	Up
Crop	19 ± 2	4 of 4	4.80	Up
Midgut	19 ± 1	0 of 4	5.00	Up
Tubule	10 ± 0	3 of 4	2.70	Up
Hindgut	16 ± 0	4 of 4	4.00	Up
Heart	7 ± 1	0 of 4	1.82	None
Fat body	22 ± 14	4 of 4	5.59	None
Ovary	7 ± 0	3 of 4	1.80	None
Testis	5 ± 0	1 of 4	1.30	None
Male accessory glands	24 ± 4	4 of 4	6.20	Up
Virgin spermatheca	10 ± 1	2 of 4	2.50	None
Mated spermatheca	13 ± 1	3 of 4	3.41	Up
Adult carcass	11 ± 1	2 of 4	3.00	Up
Larval CNS	8 ± 3	4 of 4	2.24	None
Larval Salivary gland	11 ± 2	4 of 4	2.80	None
Larval midgut	6 ± 2	0 of 4	1.59	None
Larval tubule	11 ± 1	4 of 4	2.80	Up
Larval hindgut	8 ± 1	4 of 4	2.02	None
Larval fat body	13 ± 2	3 of 4	3.40	Up
Larval trachea	4 ± 1	1 of 4	1.16	None
Larval carcass	6 ± 0	2 of 4	1.67	None
S2 cells (growing)	7 ± 1	3 of 4	1.83	None
Whole fly	4 ± 2	0 of 4

Eukaryotic initiation factor 4B (eIF-4B):

Annotation Number : CG10837
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0020660
Gbrowse : chr2RHet:2901815-2902500 (+) // 100.0 //
Probeset : 1636358_a_at
Accessions : protein= NP_001015319; /// NP_001015320; /// NP_001015321; /// NP_001015322;, nucleotide= NM_001015319; /// NM_001015320; /// NM_001015321; /// NM_001015322;
Pathway : 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // inferred from physical interaction /// 000582
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred fro
FlyMine data for FBgn0020660.
BioGrid reports that CG10837 interacts with CG31999 CG4059 .
VDRC has 1 RNAi stocks for FBgn0020660 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	588 ± 23	4 of 4	1.10	None
Head	553 ± 45	4 of 4	1.10	None
Eye	1002 ± 27	4 of 4	1.94	Up
Thoracicoabdominal ganglion	527 ± 21	4 of 4	1.00	None
Salivary gland	816 ± 49	4 of 4	1.58	Up
Crop	675 ± 60	4 of 4	1.30	None
Midgut	532 ± 4	4 of 4	1.00	None
Tubule	112 ± 1	4 of 4	0.20	Down
Hindgut	495 ± 18	4 of 4	1.00	None
Heart	524 ± 46	4 of 4	1.02	None
Fat body	497 ± 173	4 of 4	0.96	None
Ovary	697 ± 13	4 of 4	1.30	Up
Testis	221 ± 6	4 of 4	0.40	Down
Male accessory glands	611 ± 17	4 of 4	1.20	Up
Virgin spermatheca	95 ± 3	4 of 4	0.19	Down
Mated spermatheca	95 ± 7	4 of 4	0.18	Down
Adult carcass	637 ± 26	4 of 4	1.20	Up
Larval CNS	425 ± 16	4 of 4	0.82	Down
Larval Salivary gland	801 ± 112	4 of 4	1.55	None
Larval midgut	288 ± 17	4 of 4	0.56	Down
Larval tubule	740 ± 18	4 of 4	1.40	Up
Larval hindgut	276 ± 13	4 of 4	0.53	Down
Larval fat body	728 ± 42	4 of 4	1.40	Up
Larval trachea	454 ± 57	4 of 4	0.88	None
Larval carcass	371 ± 14	4 of 4	0.72	Down
S2 cells (growing)	416 ± 8	4 of 4	0.81	Down
Whole fly	516 ± 23	4 of 4

Eukaryotic initiation factor 4B (eIF-4B):

Annotation Number : CG10837
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0020660
Gbrowse : chr2RHet:2901751-2917318 (+) // 100.0 //
Probeset : 1640194_a_at
Accessions : protein= NP_001015319; /// NP_001015320; /// NP_001015321; /// NP_001015322;, nucleotide= NM_001015319; /// NM_001015320; /// NM_001015321; /// NM_001015322;
Pathway : 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // inferred from physical interaction /// 000582
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred fro
FlyMine data for FBgn0020660.
BioGrid reports that CG10837 interacts with CG31999 CG4059 .
VDRC has 1 RNAi stocks for FBgn0020660 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	852 ± 25	4 of 4	1.20	Up
Head	871 ± 64	4 of 4	1.20	None
Eye	1468 ± 41	4 of 4	2.05	Up
Thoracicoabdominal ganglion	884 ± 25	4 of 4	1.20	Up
Salivary gland	2102 ± 55	4 of 4	2.93	Up
Crop	777 ± 15	4 of 4	1.10	None
Midgut	548 ± 22	4 of 4	0.80	Down
Tubule	832 ± 18	4 of 4	1.20	Up
Hindgut	581 ± 7	4 of 4	0.80	Down
Heart	742 ± 40	4 of 4	1.04	None
Fat body	926 ± 29	4 of 4	1.29	Up
Ovary	908 ± 17	4 of 4	1.30	Up
Testis	320 ± 12	4 of 4	0.40	Down
Male accessory glands	1190 ± 10	4 of 4	1.70	Up
Virgin spermatheca	1210 ± 21	4 of 4	1.69	Up
Mated spermatheca	1170 ± 26	4 of 4	1.63	Up
Adult carcass	753 ± 21	4 of 4	1.10	None
Larval CNS	729 ± 61	4 of 4	1.02	None
Larval Salivary gland	1201 ± 73	4 of 4	1.67	Up
Larval midgut	532 ± 19	4 of 4	0.74	Down
Larval tubule	701 ± 36	4 of 4	1.00	None
Larval hindgut	565 ± 12	4 of 4	0.79	Down
Larval fat body	778 ± 64	4 of 4	1.10	None
Larval trachea	716 ± 49	4 of 4	1.00	None
Larval carcass	642 ± 26	4 of 4	0.90	None
S2 cells (growing)	371 ± 9	4 of 4	0.52	Down
Whole fly	717 ± 32	4 of 4

Looking for CG10837-RE. 3 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720