FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG1084-RA through 18771 annotations produced 1 hits

contactin (Cont):

Annotation Number : CG1084
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037240
Gbrowse : chr3R:207031-212738 (+) // 100.0 //
Probeset : 1637017_at
Accessions : protein= NP_649461;, nucleotide= NM_141204;
Pathway : 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic anno
Interpro : 0005488 // binding // inferred from electronic annotation
FlyMine data for FBgn0037240.
BDGP gene expression has embryonic in situ data for Cont: 25 pix of staining in 18 body parts.
Homophila reports that CG1084 is a close match (9e-14) to human gene MUSK (NP_005583), a gene associated with Myasthenic syndrome, congenital, associated with acetylcholine receptor deficiency, 608931 (3).
BioGrid reports that CG1084 interacts with CG8155 .
TRiP has 2 RNAi stocks for FBgn0037240 available for purchase.
VDRC has 2 RNAi stocks for FBgn0037240 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	142 ± 5	4 of 4	0.70	Down
Head	330 ± 13	4 of 4	1.70	Up
Eye	304 ± 15	4 of 4	1.53	Up
Thoracicoabdominal ganglion	139 ± 1	4 of 4	0.70	Down
Salivary gland	667 ± 36	4 of 4	3.35	Up
Crop	927 ± 15	4 of 4	4.70	Up
Midgut	47 ± 3	4 of 4	0.20	Down
Tubule	41 ± 5	4 of 4	0.20	Down
Hindgut	578 ± 6	4 of 4	2.90	Up
Heart	68 ± 3	4 of 4	0.34	Down
Fat body	87 ± 15	4 of 4	0.44	Down
Ovary	327 ± 4	4 of 4	1.60	Up
Testis	235 ± 6	4 of 4	1.20	None
Male accessory glands	741 ± 39	4 of 4	3.70	Up
Virgin spermatheca	403 ± 27	4 of 4	2.02	Up
Mated spermatheca	587 ± 68	4 of 4	2.95	Up
Adult carcass	247 ± 4	4 of 4	1.20	None
Larval CNS	283 ± 14	4 of 4	1.42	Up
Larval Salivary gland	591 ± 24	4 of 4	2.97	Up
Larval midgut	58 ± 5	4 of 4	0.29	Down
Larval tubule	21 ± 2	4 of 4	0.10	Down
Larval hindgut	652 ± 18	4 of 4	3.28	Up
Larval fat body	179 ± 9	4 of 4	0.90	None
Larval trachea	1019 ± 57	4 of 4	5.12	Up
Larval carcass	425 ± 13	4 of 4	2.14	Up
S2 cells (growing)	344 ± 8	4 of 4	1.73	Up
Whole fly	199 ± 16	4 of 4

Looking for CG1084-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720