FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG10851-RD through 18771 annotations produced 3 hits

Serine/arginine rich protein 55 (B52):

Annotation Number : CG10851
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0004587
Gbrowse : chr3R:9487021-9489304 (+) // 100.0 //
Probeset : 1632447_at
Accessions : protein= NP_001163603; /// NP_001163604; /// NP_001163605; /// NP_788665; /// NP_788666; /// NP_788668; /// NP_788669; /// NP_788670;, nucleotide= NM_001170132; /// NM_001170133; /// NM_001170134; /// NM_176488; /// NM_176489; /// NM_176491; /// NM_176492; /// NM_176493;
Pathway : via spliceosome // inferred from mutant phenotype /// 0000398 // nuclear mRNA splicing
Interpro : via spliceosome // inferred by curator /// 0000398 // nuclear mRNA splicing
FlyMine data for FBgn0004587.
BDGP gene expression has embryonic in situ data for B52: 8 pix of staining in 2 body parts.
BioGrid reports that CG10851 interacts with CG11380 CG14667 CG15067 CG31029 CG32772 CG10128 CG2759 CG2759 CG5655 CG2848 .
TRiP has 1 RNAi stocks for FBgn0004587 available for purchase.
VDRC has 3 RNAi stocks for FBgn0004587 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	141 ± 11	4 of 4	8.50	Up
Head	19 ± 3	4 of 4	1.20	None
Eye	16 ± 1	4 of 4	1.00	None
Thoracicoabdominal ganglion	38 ± 11	4 of 4	2.30	None
Salivary gland	25 ± 4	0 of 4	1.52	None
Crop	25 ± 2	4 of 4	1.50	None
Midgut	21 ± 2	1 of 4	1.30	None
Tubule	10 ± 1	2 of 4	0.60	Down
Hindgut	25 ± 2	4 of 4	1.50	None
Heart	10 ± 1	1 of 4	0.62	None
Fat body	11 ± 4	4 of 4	0.70	None
Ovary	16 ± 1	4 of 4	1.00	None
Testis	6 ± 0	3 of 4	0.40	None
Male accessory glands	35 ± 1	4 of 4	2.10	Up
Virgin spermatheca	6 ± 1	1 of 4	0.40	None
Mated spermatheca	8 ± 2	1 of 4	0.50	None
Adult carcass	31 ± 5	3 of 4	1.90	None
Larval CNS	29 ± 7	4 of 4	1.75	Up
Larval Salivary gland	19 ± 6	3 of 4	1.14	None
Larval midgut	9 ± 1	2 of 4	0.56	None
Larval tubule	18 ± 2	4 of 4	1.10	None
Larval hindgut	14 ± 1	4 of 4	0.88	None
Larval fat body	45 ± 9	4 of 4	2.70	Up
Larval trachea	17 ± 1	4 of 4	1.04	None
Larval carcass	11 ± 1	2 of 4	0.67	None
S2 cells (growing)	28 ± 2	4 of 4	1.74	Up
Whole fly	16 ± 3	4 of 4

Serine/arginine rich protein 55 (B52):

Annotation Number : CG10851
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0004587
Gbrowse : chr3R:9487021-9489304 (+) // 100.0 //
Probeset : 1624547_s_at
Accessions : protein= NP_001163603; /// NP_001163604; /// NP_001163605; /// NP_788665; /// NP_788666; /// NP_788668; /// NP_788669; /// NP_788670;, nucleotide= NM_001170132; /// NM_001170133; /// NM_001170134; /// NM_176488; /// NM_176489; /// NM_176491; /// NM_176492; /// NM_176493;
Pathway : via spliceosome // inferred from mutant phenotype /// 0000398 // nuclear mRNA splicing
Interpro : via spliceosome // inferred by curator /// 0000398 // nuclear mRNA splicing
FlyMine data for FBgn0004587.
BDGP gene expression has embryonic in situ data for B52: 8 pix of staining in 2 body parts.
BioGrid reports that CG10851 interacts with CG11380 CG14667 CG15067 CG31029 CG32772 CG10128 CG2759 CG2759 CG5655 CG2848 .
TRiP has 1 RNAi stocks for FBgn0004587 available for purchase.
VDRC has 3 RNAi stocks for FBgn0004587 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	313 ± 12	4 of 4	0.70	Down
Head	195 ± 15	4 of 4	0.40	Down
Eye	142 ± 12	4 of 4	0.32	Down
Thoracicoabdominal ganglion	143 ± 9	4 of 4	0.30	Down
Salivary gland	192 ± 18	4 of 4	0.43	Down
Crop	316 ± 17	4 of 4	0.70	Down
Midgut	257 ± 10	4 of 4	0.60	Down
Tubule	67 ± 3	4 of 4	0.20	Down
Hindgut	257 ± 10	4 of 4	0.60	Down
Heart	162 ± 10	4 of 4	0.36	Down
Fat body	206 ± 55	4 of 4	0.46	Down
Ovary	939 ± 20	4 of 4	2.10	Up
Testis	97 ± 10	4 of 4	0.20	Down
Male accessory glands	253 ± 12	4 of 4	0.60	Down
Virgin spermatheca	31 ± 2	4 of 4	0.07	Down
Mated spermatheca	50 ± 5	4 of 4	0.11	Down
Adult carcass	206 ± 13	4 of 4	0.50	Down
Larval CNS	925 ± 51	4 of 4	2.05	Up
Larval Salivary gland	538 ± 47	4 of 4	1.19	None
Larval midgut	169 ± 7	4 of 4	0.38	Down
Larval tubule	407 ± 28	4 of 4	0.90	None
Larval hindgut	288 ± 16	4 of 4	0.64	Down
Larval fat body	353 ± 31	4 of 4	0.80	Down
Larval trachea	453 ± 80	4 of 4	1.00	None
Larval carcass	366 ± 17	4 of 4	0.81	Down
S2 cells (growing)	1092 ± 11	4 of 4	2.42	Up
Whole fly	451 ± 18	4 of 4

Serine/arginine rich protein 55 (B52):

Annotation Number : CG10851
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0004587
Gbrowse : chr3R:9487021-9492617 (+) // 100.0 //
Probeset : 1628399_s_at
Accessions : protein= NP_001163603; /// NP_001163604; /// NP_001163605; /// NP_788665; /// NP_788666; /// NP_788668; /// NP_788669; /// NP_788670;, nucleotide= NM_001170132; /// NM_001170133; /// NM_001170134; /// NM_176488; /// NM_176489; /// NM_176491; /// NM_176492; /// NM_176493;
Pathway : via spliceosome // inferred from mutant phenotype /// 0000398 // nuclear mRNA splicing
Interpro : via spliceosome // inferred by curator /// 0000398 // nuclear mRNA splicing
FlyMine data for FBgn0004587.
BDGP gene expression has embryonic in situ data for B52: 8 pix of staining in 2 body parts.
BioGrid reports that CG10851 interacts with CG11380 CG14667 CG15067 CG31029 CG32772 CG10128 CG2759 CG2759 CG5655 CG2848 .
TRiP has 1 RNAi stocks for FBgn0004587 available for purchase.
VDRC has 3 RNAi stocks for FBgn0004587 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	1440 ± 53	4 of 4	1.40	Up
Head	662 ± 22	4 of 4	0.60	Down
Eye	774 ± 38	4 of 4	0.74	Down
Thoracicoabdominal ganglion	1108 ± 58	4 of 4	1.10	None
Salivary gland	831 ± 18	4 of 4	0.79	Down
Crop	1054 ± 17	4 of 4	1.00	None
Midgut	683 ± 11	4 of 4	0.70	Down
Tubule	676 ± 20	4 of 4	0.60	Down
Hindgut	760 ± 12	4 of 4	0.70	Down
Heart	513 ± 9	4 of 4	0.49	Down
Fat body	865 ± 65	4 of 4	0.83	Down
Ovary	1739 ± 15	4 of 4	1.70	Up
Testis	301 ± 9	4 of 4	0.30	Down
Male accessory glands	1180 ± 69	4 of 4	1.10	None
Virgin spermatheca	921 ± 24	4 of 4	0.88	Down
Mated spermatheca	1017 ± 32	4 of 4	0.97	None
Adult carcass	572 ± 21	4 of 4	0.50	Down
Larval CNS	2423 ± 114	4 of 4	2.32	Up
Larval Salivary gland	1359 ± 59	4 of 4	1.30	Up
Larval midgut	767 ± 11	4 of 4	0.73	Down
Larval tubule	993 ± 18	4 of 4	0.90	None
Larval hindgut	1275 ± 65	4 of 4	1.22	Up
Larval fat body	920 ± 51	4 of 4	0.90	None
Larval trachea	1302 ± 133	4 of 4	1.25	Up
Larval carcass	1271 ± 81	4 of 4	1.22	None
S2 cells (growing)	1753 ± 33	4 of 4	1.68	Up
Whole fly	1046 ± 39	4 of 4

Looking for CG10851-RD. 3 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720