FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG10899-RB through 18771 annotations produced 2 hits

(CG10899):

Annotation Number : CG10899
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0039235
Gbrowse : chr3R:20682103-20683263 (-) // 100.0 //
Probeset : 1630041_at
Accessions : protein= NP_651298; /// NP_733050;, nucleotide= NM_143041; /// NM_170174;
Interpro : 0004089 // carbonate dehydratase activity // inferred from sequence or structural similarity /// 0004089 // carbonate de
FlyMine data for FBgn0039235.
BDGP gene expression has embryonic in situ data for CG10899: 4 pix of staining in 1 body parts.
Homophila reports that CG10899 is a close match (1e-13) to human gene CA2 (NP_000058), a gene associated with Osteopetrosis, autosomal recessive 3, with renal tubular acidosis, 259730 (3).
VDRC has 2 RNAi stocks for FBgn0039235 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	4 ± 0	0 of 4	1.10	None
Head	1 ± 0	0 of 4	0.40	None
Eye	1 ± 0	0 of 4	0.33	None
Thoracicoabdominal ganglion	6 ± 0	1 of 4	1.50	None
Salivary gland	12 ± 2	0 of 4	2.76	Up
Crop	4 ± 1	1 of 4	1.00	None
Midgut	2 ± 0	0 of 4	0.70	None
Tubule	4 ± 0	0 of 4	0.90	None
Hindgut	4 ± 1	0 of 4	0.90	None
Heart	1 ± 0	0 of 4	0.35	None
Fat body	5 ± 2	0 of 4	1.29	None
Ovary	2 ± 1	0 of 4	0.60	None
Testis	26 ± 3	4 of 4	6.10	Up
Male accessory glands	8 ± 2	1 of 4	1.90	None
Virgin spermatheca	7 ± 1	3 of 4	1.73	None
Mated spermatheca	9 ± 0	3 of 4	2.24	Up
Adult carcass	16 ± 1	3 of 4	3.80	Up
Larval CNS	3 ± 1	1 of 4	0.91	None
Larval Salivary gland	4 ± 1	0 of 4	1.11	None
Larval midgut	5 ± 1	0 of 4	1.17	None
Larval tubule	5 ± 1	0 of 4	1.30	None
Larval hindgut	4 ± 1	1 of 4	0.95	None
Larval fat body	8 ± 0	1 of 4	2.00	Up
Larval trachea	4 ± 1	1 of 4	1.07	None
Larval carcass	4 ± 0	0 of 4	0.97	None
S2 cells (growing)	5 ± 0	1 of 4	1.24	None
Whole fly	4 ± 1	2 of 4

(CG10899):

Annotation Number : CG10899
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0039235
Gbrowse : chr3R:20682103-20683263 (-) // 100.0 //
Probeset : 1630773_a_at
Accessions : protein= NP_651298; /// NP_733050;, nucleotide= NM_143041; /// NM_170174;
Interpro : 0004089 // carbonate dehydratase activity // inferred from sequence or structural similarity /// 0004089 // carbonate de
FlyMine data for FBgn0039235.
BDGP gene expression has embryonic in situ data for CG10899: 4 pix of staining in 1 body parts.
Homophila reports that CG10899 is a close match (1e-13) to human gene CA2 (NP_000058), a gene associated with Osteopetrosis, autosomal recessive 3, with renal tubular acidosis, 259730 (3).
VDRC has 2 RNAi stocks for FBgn0039235 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	3 ± 1	0 of 4	0.00	Down
Head	2 ± 0	0 of 4	0.00	Down
Eye	2 ± 0	0 of 4	0.03	Down
Thoracicoabdominal ganglion	3 ± 1	0 of 4	0.00	Down
Salivary gland	13 ± 2	0 of 4	0.19	Down
Crop	2 ± 0	0 of 4	0.00	Down
Midgut	11 ± 0	0 of 4	0.20	Down
Tubule	3 ± 0	0 of 4	0.00	Down
Hindgut	7 ± 1	0 of 4	0.10	Down
Heart	3 ± 1	0 of 4	0.05	Down
Fat body	2 ± 2	0 of 4	0.03	Down
Ovary	1 ± 0	0 of 4	0.00	Down
Testis	866 ± 23	4 of 4	12.10	Up
Male accessory glands	25 ± 2	4 of 4	0.30	Down
Virgin spermatheca	3 ± 2	0 of 4	0.05	Down
Mated spermatheca	1 ± 0	0 of 4	0.02	Down
Adult carcass	6 ± 2	0 of 4	0.10	Down
Larval CNS	2 ± 1	0 of 4	0.03	Down
Larval Salivary gland	4 ± 2	1 of 4	0.07	Down
Larval midgut	3 ± 1	0 of 4	0.05	Down
Larval tubule	8 ± 0	0 of 4	0.10	Down
Larval hindgut	6 ± 1	2 of 4	0.09	Down
Larval fat body	55 ± 30	3 of 4	0.80	None
Larval trachea	9 ± 3	4 of 4	0.14	Down
Larval carcass	4 ± 1	0 of 4	0.07	Down
S2 cells (growing)	5 ± 0	0 of 4	0.08	Down
Whole fly	71 ± 8	4 of 4

Looking for CG10899-RB. 2 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720