FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG10919-RA through 18771 annotations produced 1 hits

(CG10919):

Annotation Number : CG10919
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037514
Gbrowse : chr3R:3583892-3585336 (+) // 100.0 //
Probeset : 1635857_at
Accessions : protein= NP_649733;, nucleotide= NM_141476;
FlyMine data for FBgn0037514.
VDRC has 3 RNAi stocks for FBgn0037514 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	3 ± 1	0 of 4	0.00	Down
Head	5 ± 0	1 of 4	0.00	Down
Eye	1 ± 1	0 of 4	0.02	Down
Thoracicoabdominal ganglion	6 ± 1	0 of 4	0.10	Down
Salivary gland	6 ± 2	0 of 4	0.06	Down
Crop	6 ± 2	0 of 4	0.10	Down
Midgut	4 ± 1	0 of 4	0.00	Down
Tubule	5 ± 0	0 of 4	0.10	Down
Hindgut	4 ± 1	0 of 4	0.00	Down
Heart	1 ± 1	0 of 4	0.02	Down
Fat body	5 ± 3	0 of 4	0.05	Down
Ovary	1 ± 0	0 of 4	0.00	Down
Testis	1072 ± 32	4 of 4	9.90	Up
Male accessory glands	6 ± 1	0 of 4	0.10	Down
Virgin spermatheca	6 ± 0	0 of 4	0.06	Down
Mated spermatheca	6 ± 1	0 of 4	0.06	Down
Adult carcass	9 ± 2	0 of 4	0.10	Down
Larval CNS	5 ± 2	0 of 4	0.05	Down
Larval Salivary gland	8 ± 0	0 of 4	0.08	Down
Larval midgut	1 ± 0	0 of 4	0.01	Down
Larval tubule	6 ± 1	1 of 4	0.10	Down
Larval hindgut	5 ± 1	0 of 4	0.05	Down
Larval fat body	173 ± 87	4 of 4	1.60	None
Larval trachea	5 ± 6	0 of 4	0.05	Down
Larval carcass	4 ± 0	0 of 4	0.04	Down
S2 cells (growing)	3 ± 0	0 of 4	0.03	Down
Whole fly	107 ± 5	4 of 4

Looking for CG10919-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720