FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG10931-RA through 18771 annotations produced 1 hits

(CG10931):

Annotation Number : CG10931
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0034274
Gbrowse : chr2R:13636522-13637560 (+) // 100.0 //
Probeset : 1626909_at
Accessions : protein= NP_611261;, nucleotide= NM_137417;
FlyMine data for FBgn0034274.
Homophila reports that CG10931 is a close match (4e-14) to human gene BRWD3;MRX93 (NP_694984), a gene associated with Mental retardation, X-linked 93, 300659 (3).
VDRC has 2 RNAi stocks for FBgn0034274 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	2 ± 1	0 of 4	0.20	Down
Head	3 ± 1	0 of 4	0.20	Down
Eye	3 ± 1	0 of 4	0.22	Down
Thoracicoabdominal ganglion	7 ± 1	0 of 4	0.40	Down
Salivary gland	16 ± 9	0 of 4	1.06	None
Crop	6 ± 0	1 of 4	0.40	Down
Midgut	11 ± 4	1 of 4	0.70	None
Tubule	7 ± 1	0 of 4	0.50	Down
Hindgut	7 ± 1	0 of 4	0.40	Down
Heart	2 ± 0	0 of 4	0.18	Down
Fat body	4 ± 2	0 of 4	0.26	Down
Ovary	5 ± 0	0 of 4	0.30	Down
Testis	222 ± 7	4 of 4	14.00	Up
Male accessory glands	9 ± 1	0 of 4	0.60	Down
Virgin spermatheca	5 ± 2	1 of 4	0.36	Down
Mated spermatheca	7 ± 0	0 of 4	0.45	Down
Adult carcass	10 ± 1	0 of 4	0.70	None
Larval CNS	6 ± 1	2 of 4	0.41	Down
Larval Salivary gland	8 ± 1	0 of 4	0.53	Down
Larval midgut	3 ± 1	0 of 4	0.22	Down
Larval tubule	7 ± 2	0 of 4	0.50	Down
Larval hindgut	9 ± 1	3 of 4	0.58	Down
Larval fat body	40 ± 20	3 of 4	2.50	None
Larval trachea	3 ± 1	0 of 4	0.19	Down
Larval carcass	3 ± 0	0 of 4	0.24	Down
S2 cells (growing)	5 ± 0	0 of 4	0.35	Down
Whole fly	15 ± 0	4 of 4

Looking for CG10931-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720