Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG1098-RA through 18771 annotations produced 1 hits



MLF1-adaptor molecule (Madm):

Annotation Number : CG1098
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0027497
Gbrowse : chr3R:1568213-1571789 (+) // 100.0 //
Probeset : 1639453_at
Accessions : protein= NP_649581;, nucleotide= NM_141324;
Pathway : 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay
Interpro : 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase
FlyMine data for FBgn0027497.
BDGP gene expression has embryonic in situ data for BcDNA:LD28657: 4 pix of staining in 1 body parts.
Homophila reports that CG1098 is a close match (8e-26) to human gene PHA2B;PRKWNK4;WNK4 (NP_115763), a gene associated with Pseudohypoaldosteronism type II, 145260 (3).
TRiP has 4 RNAi stocks for FBgn0027497 available for purchase.
VDRC has 3 RNAi stocks for FBgn0027497 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain157 64 of 4 2.70Up
Head53 44 of 4 0.90None
Eye50 04 of 4 0.87Down
Thoracicoabdominal ganglion139 104 of 4 2.40Up
Salivary gland269 84 of 4 4.59Up
Crop142 54 of 4 2.40Up
Midgut48 34 of 4 0.80Down
Tubule57 34 of 4 1.00None
Hindgut89 24 of 4 1.50Up
Heart67 44 of 4 1.15None
Fat body45 54 of 4 0.77Down
Ovary109 54 of 4 1.90Up
Testis49 34 of 4 0.80None
Male accessory glands113 44 of 4 1.90Up
Virgin spermatheca75 44 of 4 1.28Up
Mated spermatheca72 34 of 4 1.23Up
Adult carcass50 54 of 4 0.90None
Larval CNS99 114 of 4 1.70Up
Larval Salivary gland137 54 of 4 2.35Up
Larval midgut66 64 of 4 1.13None
Larval tubule90 34 of 4 1.50Up
Larval hindgut102 34 of 4 1.74Up
Larval fat body38 14 of 4 0.70Down
Larval trachea82 114 of 4 1.42Up
Larval carcass82 14 of 4 1.40Up
S2 cells (growing)80 24 of 4 1.38Up
Whole fly58 14 of 4

Looking for CG1098-RA. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime