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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG11012-RA through 18771 annotations produced 1 hits



UDP-glycosyltransferase 37a1 (Ugt37a1):

Annotation Number : CG11012
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0026756
Gbrowse : chr2L:20372472-20373967 (-) // 100.0 //
Probeset : 1630616_at
Accessions : protein= NP_523607;, nucleotide= NM_078883;
Interpro : "0015020 // glucuronosyltransferase activity // inferred from sequence or structural similarity /// 0015020 // glucurono
FlyMine data for FBgn0026756.
Homophila reports that CG11012 is a close match (2e-36) to human gene GNT1;UGT1;UGT1A1 (NP_000454), a gene associated with Crigler-Najjar syndrome, type I, 218800 (3);Crigler-Najjar syndrome, type II, 606785 (3);Hyperbilirubinemia, familial transcient neonatal, 237900 (3);[Gilbert syndrome], 143500 (3).
VDRC has 3 RNAi stocks for FBgn0026756 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain0 ± 00 of 4 0.20None
Head2 ± 10 of 4 0.80None
Eye2 ± 11 of 4 0.69None
Thoracicoabdominal ganglion3 ± 10 of 4 1.00None
Salivary gland8 ± 20 of 4 2.40None
Crop4 ± 10 of 4 1.30None
Midgut48 ± 44 of 413.50Up
Tubule7 ± 00 of 4 2.00Up
Hindgut9 ± 10 of 4 2.70Up
Heart1 ± 00 of 4 0.45None
Fat body9 ± 20 of 4 2.62Up
Ovary3 ± 00 of 4 0.90None
Testis4 ± 10 of 4 1.20None
Male accessory glands11 ± 30 of 4 3.30None
Virgin spermatheca8 ± 10 of 4 2.26Up
Mated spermatheca8 ± 12 of 4 2.27None
Adult carcass8 ± 20 of 4 2.20None
Larval CNS2 ± 10 of 4 0.81None
Larval Salivary gland5 ± 10 of 4 1.55None
Larval midgut6 ± 10 of 4 1.75None
Larval tubule8 ± 10 of 4 2.30None
Larval hindgut0 ± 00 of 4 0.20None
Larval fat body11 ± 30 of 4 3.20None
Larval trachea3 ± 30 of 4 0.88None
Larval carcass4 ± 10 of 4 1.13None
S2 cells (growing)5 ± 10 of 4 1.44None
Whole fly3 ± 10 of 4

Looking for CG11012-RA. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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