Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG11033-RA through 18771 annotations produced 1 hits



(CG11033):

Annotation Number : CG11033
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037659
Gbrowse : chr3R:4878239-4888967 (+) // 100.0 //
Probeset : 1634555_at
Accessions : protein= NP_649864;, nucleotide= NM_141607;
Pathway : 0005634 // nucleus // inferred from electronic annotation
Interpro : "0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical
FlyMine data for FBgn0037659.
Homophila reports that CG11033 is a close match (3e-76) to human gene KIAA1111;MRXSSD;PHF8;ZNF422 (NP_055922), a gene associated with Mental retardation syndrome, X-linked, Siderius type, 300263 (3).
BioGrid reports that CG11033 interacts with CG12673 .
TRiP has 2 RNAi stocks for FBgn0037659 available for purchase.
VDRC has 2 RNAi stocks for FBgn0037659 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain348 34 of 4 2.70Up
Head157 74 of 4 1.20None
Eye126 14 of 4 0.97None
Thoracicoabdominal ganglion262 64 of 4 2.00Up
Salivary gland113 14 of 4 0.87None
Crop176 104 of 4 1.40Up
Midgut69 43 of 4 0.50Down
Tubule163 104 of 4 1.30Up
Hindgut129 44 of 4 1.00None
Heart84 44 of 4 0.65Down
Fat body84 74 of 4 0.65Down
Ovary274 54 of 4 2.10Up
Testis38 24 of 4 0.30Down
Male accessory glands113 44 of 4 0.90None
Virgin spermatheca112 64 of 4 0.86None
Mated spermatheca123 94 of 4 0.95None
Adult carcass108 74 of 4 0.80None
Larval CNS384 544 of 4 2.95Up
Larval Salivary gland138 64 of 4 1.06None
Larval midgut69 24 of 4 0.53Down
Larval tubule119 94 of 4 0.90None
Larval hindgut121 34 of 4 0.93None
Larval fat body89 34 of 4 0.70Down
Larval trachea183 124 of 4 1.41Up
Larval carcass110 104 of 4 0.85None
S2 cells (growing)363 84 of 4 2.78Up
Whole fly130 84 of 4

Looking for CG11033-RA. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime