FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG11130-RA through 18771 annotations produced 1 hits

Rtc1 (Rtc1):

Annotation Number : CG11130
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0020909
Gbrowse : chrX:13651209-13652634 (+) // 100.0 //
Probeset : 1638146_at
Accessions : protein= NP_572919;, nucleotide= NM_132691;
Pathway : 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0
Interpro : 0003824 // catalytic activity // inferred from electronic annotation /// 0003963 // RNA-3'-phosphate cyclase activity //
FlyMine data for FBgn0020909.
BDGP gene expression has embryonic in situ data for Rtc1: 4 pix of staining in 1 body parts.
VDRC has 1 RNAi stocks for FBgn0020909 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	66 ± 6	4 of 4	0.40	Down
Head	74 ± 7	4 of 4	0.40	Down
Eye	45 ± 5	4 of 4	0.27	Down
Thoracicoabdominal ganglion	67 ± 3	4 of 4	0.40	Down
Salivary gland	89 ± 7	4 of 4	0.53	Down
Crop	99 ± 3	4 of 4	0.60	Down
Midgut	80 ± 3	4 of 4	0.50	Down
Tubule	80 ± 12	4 of 4	0.50	Down
Hindgut	83 ± 2	4 of 4	0.50	Down
Heart	55 ± 2	4 of 4	0.33	Down
Fat body	93 ± 12	4 of 4	0.56	Down
Ovary	252 ± 2	4 of 4	1.50	Up
Testis	41 ± 2	4 of 4	0.20	Down
Male accessory glands	96 ± 2	4 of 4	0.60	Down
Virgin spermatheca	61 ± 3	4 of 4	0.37	Down
Mated spermatheca	81 ± 4	4 of 4	0.48	Down
Adult carcass	83 ± 4	4 of 4	0.50	Down
Larval CNS	149 ± 8	4 of 4	0.89	None
Larval Salivary gland	115 ± 8	4 of 4	0.69	Down
Larval midgut	65 ± 9	4 of 4	0.39	Down
Larval tubule	44 ± 3	4 of 4	0.30	Down
Larval hindgut	80 ± 8	4 of 4	0.48	Down
Larval fat body	49 ± 1	4 of 4	0.30	Down
Larval trachea	154 ± 18	4 of 4	0.92	None
Larval carcass	94 ± 14	4 of 4	0.57	Down
S2 cells (growing)	193 ± 1	4 of 4	1.15	Up
Whole fly	167 ± 7	4 of 4

Looking for CG11130-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720