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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG11143-RA through 18771 annotations produced 1 hits



myo-inositol-1-phosphate-synthase (Inos):

Annotation Number : CG11143
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0025885
Gbrowse : chr2R:3342095-3346378 (-) // 100.0 //
Probeset : 1635848_at
Accessions : protein= NP_477405;, nucleotide= NM_058057;
Pathway : 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electr
Interpro : 0003824 // catalytic activity // inferred from electronic annotation /// 0004512 // inositol-3-phosphate synthase activi
FlyMine data for FBgn0025885.
VDRC has 3 RNAi stocks for FBgn0025885 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain310 ± 514 of 4 1.00None
Head1163 ± 2924 of 4 3.60None
Eye476 ± 544 of 4 1.47None
Thoracicoabdominal ganglion193 ± 94 of 4 0.60None
Salivary gland177 ± 134 of 4 0.55None
Crop339 ± 504 of 4 1.00None
Midgut61 ± 64 of 4 0.20None
Tubule141 ± 124 of 4 0.40Down
Hindgut798 ± 1244 of 4 2.50Up
Heart994 ± 2774 of 4 3.07None
Fat body53 ± 184 of 4 0.16None
Ovary584 ± 194 of 4 1.80None
Testis770 ± 264 of 4 2.40Up
Male accessory glands36 ± 34 of 4 0.10Down
Virgin spermatheca32 ± 24 of 4 0.10Down
Mated spermatheca33 ± 34 of 4 0.10Down
Adult carcass249 ± 254 of 4 0.80None
Larval CNS516 ± 1634 of 4 1.59None
Larval Salivary gland39 ± 34 of 4 0.12Down
Larval midgut25 ± 83 of 4 0.08Down
Larval tubule38 ± 54 of 4 0.10Down
Larval hindgut1204 ± 604 of 4 3.71Up
Larval fat body36 ± 24 of 4 0.10Down
Larval trachea1029 ± 4544 of 4 3.17Up
Larval carcass710 ± 1284 of 4 2.19None
S2 cells (growing)1158 ± 884 of 4 3.57Up
Whole fly324 ± 864 of 4

Looking for CG11143-RA. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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