FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG11153-RA through 18771 annotations produced 1 hits

Sox102F (Sox102F):

Annotation Number : CG11153
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0039938
Gbrowse : chr4:821908-827971 (-) // 100.0 //
Probeset : 1636331_at
Accessions : protein= NP_001014695; /// NP_726612;, nucleotide= NM_001014695; /// NM_166792;
Pathway : 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic
Interpro : 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription
FlyMine data for FBgn0039938.
BDGP gene expression has embryonic in situ data for Sox102F: 26 pix of staining in 4 body parts.
Homophila reports that CG11153 is a close match (9e-14) to human gene MRGH;SOX3 (NP_005625), a gene associated with Mental retardation, X-linked, with isolated growth hormone deficiency, 300123 (3);Panhypopituitarism, X-linked, 312000 (3).
TRiP has 1 RNAi stocks for FBgn0039938 available for purchase.
VDRC has 1 RNAi stocks for FBgn0039938 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	147 ± 3	4 of 4	4.20	Up
Head	94 ± 13	4 of 4	2.70	Up
Eye	25 ± 4	4 of 4	0.73	None
Thoracicoabdominal ganglion	9 ± 1	2 of 4	0.30	Down
Salivary gland	14 ± 2	0 of 4	0.41	Down
Crop	179 ± 7	4 of 4	5.10	Up
Midgut	2 ± 0	0 of 4	0.10	Down
Tubule	2 ± 0	0 of 4	0.10	Down
Hindgut	25 ± 0	4 of 4	0.70	Down
Heart	86 ± 8	4 of 4	2.48	Up
Fat body	225 ± 29	4 of 4	6.41	Up
Ovary	7 ± 0	3 of 4	0.20	Down
Testis	6 ± 1	2 of 4	0.20	Down
Male accessory glands	6 ± 2	0 of 4	0.20	Down
Virgin spermatheca	79 ± 5	4 of 4	2.26	Up
Mated spermatheca	77 ± 4	4 of 4	2.20	Up
Adult carcass	153 ± 14	4 of 4	4.40	Up
Larval CNS	60 ± 5	4 of 4	1.71	Up
Larval Salivary gland	1 ± 0	0 of 4	0.03	Down
Larval midgut	3 ± 1	0 of 4	0.10	Down
Larval tubule	1 ± 0	0 of 4	0.00	Down
Larval hindgut	3 ± 0	0 of 4	0.10	Down
Larval fat body	7 ± 0	1 of 4	0.20	Down
Larval trachea	4 ± 2	0 of 4	0.13	Down
Larval carcass	19 ± 2	4 of 4	0.54	Down
S2 cells (growing)	1 ± 0	0 of 4	0.03	Down
Whole fly	35 ± 1	4 of 4

Looking for CG11153-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720