FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG11173-RA through 18771 annotations produced 1 hits

ubisnap (usnp):

Annotation Number : CG11173
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0034913
Gbrowse : chr2R:19731003-19732248 (-) // 100.0 //
Probeset : 1625742_at
Accessions : protein= NP_523831;, nucleotide= NM_079107;
Pathway : 0019717 // synaptosome // inferred from electronic annotation
Interpro : 0005483 // soluble NSF attachment protein activity // inferred from sequence or structural similarity /// 0005484 // SNA
FlyMine data for FBgn0034913.
BDGP gene expression has embryonic in situ data for usnp: 10 pix of staining in 5 body parts.
Homophila reports that CG11173 is a close match (2e-17) to human gene SNAP29;CEDNIK (NP_004773), a gene associated with Cerebral dysgenesis, neuropathy, ichthyosis, and palmoplantar keratoderma syndrome, 609528 (3).
BioGrid reports that CG11173 interacts with CG2715 CG31136 CG6625 CG13510 CG14145 CG15693 CG17246 CG30291 CG3217 CG3907 CG3937 CG5939 CG7199 CG7758 CG9415 CG3161 .
TRiP has 1 RNAi stocks for FBgn0034913 available for purchase.
VDRC has 3 RNAi stocks for FBgn0034913 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	325 ± 5	4 of 4	1.20	Up
Head	272 ± 7	4 of 4	1.00	None
Eye	390 ± 13	4 of 4	1.46	Up
Thoracicoabdominal ganglion	259 ± 5	4 of 4	1.00	None
Salivary gland	223 ± 6	4 of 4	0.83	Down
Crop	251 ± 7	4 of 4	0.90	None
Midgut	184 ± 6	4 of 4	0.70	Down
Tubule	227 ± 11	4 of 4	0.80	Down
Hindgut	169 ± 4	4 of 4	0.60	Down
Heart	1060 ± 67	4 of 4	3.96	Up
Fat body	199 ± 7	4 of 4	0.75	Down
Ovary	384 ± 7	4 of 4	1.40	Up
Testis	373 ± 6	4 of 4	1.40	Up
Male accessory glands	244 ± 5	4 of 4	0.90	None
Virgin spermatheca	283 ± 14	4 of 4	1.06	None
Mated spermatheca	311 ± 8	4 of 4	1.16	Up
Adult carcass	215 ± 4	4 of 4	0.80	Down
Larval CNS	376 ± 29	4 of 4	1.41	Up
Larval Salivary gland	354 ± 13	4 of 4	1.32	Up
Larval midgut	292 ± 18	4 of 4	1.09	None
Larval tubule	633 ± 19	4 of 4	2.40	Up
Larval hindgut	227 ± 13	4 of 4	0.85	None
Larval fat body	492 ± 25	4 of 4	1.80	Up
Larval trachea	307 ± 10	4 of 4	1.15	Up
Larval carcass	226 ± 14	4 of 4	0.85	None
S2 cells (growing)	371 ± 7	4 of 4	1.39	Up
Whole fly	267 ± 10	4 of 4

Looking for CG11173-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720