FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG11184-RC through 18771 annotations produced 1 hits

Upf3 (Upf3):

Annotation Number : CG11184
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0034923
Gbrowse : chr2R:19780763-19782510 (-) // 100.0 //
Probeset : 1630386_at
Accessions : protein= NP_726375;, nucleotide= NM_166629;
Pathway : nonsense-mediated decay // inferred from mutant phenotype /// 0016246 // RNA interference // inferred from mutant pheno
FlyMine data for FBgn0034923.
Homophila reports that CG11184 is a close match (2e-19) to human gene MRXS14;RENT3B;UPF3B (NP_542199), a gene associated with Mental retardation, X-linked, syndromic 14, 300676 (3).
BioGrid reports that CG11184 interacts with CG14853 .
VDRC has 2 RNAi stocks for FBgn0034923 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	2 ± 0	1 of 4	0.90	None
Head	1 ± 0	0 of 4	0.40	None
Eye	1 ± 0	0 of 4	0.55	None
Thoracicoabdominal ganglion	3 ± 0	0 of 4	1.10	None
Salivary gland	3 ± 0	0 of 4	1.34	None
Crop	3 ± 0	0 of 4	1.20	None
Midgut	4 ± 1	1 of 4	1.70	None
Tubule	4 ± 0	0 of 4	1.70	Up
Hindgut	3 ± 1	0 of 4	1.30	None
Heart	1 ± 1	0 of 4	0.57	None
Fat body	2 ± 0	1 of 4	0.99	None
Ovary	2 ± 0	0 of 4	0.80	None
Testis	3 ± 1	2 of 4	1.30	None
Male accessory glands	4 ± 1	0 of 4	1.80	None
Virgin spermatheca	3 ± 2	1 of 4	1.39	None
Mated spermatheca	2 ± 1	0 of 4	1.00	None
Adult carcass	4 ± 1	0 of 4	1.70	None
Larval CNS	4 ± 1	3 of 4	1.64	None
Larval Salivary gland	4 ± 1	0 of 4	1.46	None
Larval midgut	3 ± 0	0 of 4	1.26	None
Larval tubule	3 ± 1	1 of 4	1.30	None
Larval hindgut	4 ± 0	0 of 4	1.46	None
Larval fat body	4 ± 1	2 of 4	1.70	None
Larval trachea	3 ± 2	0 of 4	1.10	None
Larval carcass	4 ± 1	0 of 4	1.69	None
S2 cells (growing)	3 ± 0	1 of 4	1.25	None
Whole fly	2 ± 0	0 of 4

Looking for CG11184-RC. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720