FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG11276-RA through 18771 annotations produced 1 hits

Ribosomal protein S4 (RpS4):

Annotation Number : CG11276
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0011284
Gbrowse : chr3L:13034855-13037012 (+) // 100.0 //
Probeset : 1639949_s_at
Accessions : protein= NP_524053; /// NP_729871;, nucleotide= NM_079329; /// NM_168537;
Pathway : 0005622 // intracellular // inferred from electronic annotation /// 0005811 // lipid particle // inferred from direct as
Interpro : 0003723 // RNA binding // inferred from electronic annotation /// 0003735 // structural constituent of ribosome // infer
FlyMine data for FBgn0011284.
BioGrid reports that CG11276 interacts with CG14112 CG6196 CG6950 CG7146 .
VDRC has 4 RNAi stocks for FBgn0011284 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	2727 ± 41	4 of 4	0.70	Down
Head	4116 ± 107	4 of 4	1.10	Up
Eye	5576 ± 82	4 of 4	1.51	Up
Thoracicoabdominal ganglion	3964 ± 130	4 of 4	1.10	None
Salivary gland	10251 ± 390	4 of 4	2.78	Up
Crop	5228 ± 280	4 of 4	1.40	Up
Midgut	4554 ± 166	4 of 4	1.20	Up
Tubule	4464 ± 77	4 of 4	1.20	Up
Hindgut	4418 ± 108	4 of 4	1.20	Up
Heart	5988 ± 367	4 of 4	1.62	Up
Fat body	5143 ± 633	4 of 4	1.39	Up
Ovary	3209 ± 69	4 of 4	0.90	Down
Testis	895 ± 29	4 of 4	0.20	Down
Male accessory glands	8628 ± 269	4 of 4	2.30	Up
Virgin spermatheca	5346 ± 195	4 of 4	1.45	Up
Mated spermatheca	5556 ± 180	4 of 4	1.51	Up
Adult carcass	5568 ± 259	4 of 4	1.50	Up
Larval CNS	2569 ± 183	4 of 4	0.70	Down
Larval Salivary gland	7207 ± 385	4 of 4	1.95	Up
Larval midgut	4324 ± 82	4 of 4	1.17	Up
Larval tubule	4502 ± 65	4 of 4	1.20	Up
Larval hindgut	3994 ± 63	4 of 4	1.08	None
Larval fat body	7058 ± 797	4 of 4	1.90	Up
Larval trachea	5662 ± 207	4 of 4	1.54	Up
Larval carcass	4237 ± 311	4 of 4	1.15	None
S2 cells (growing)	4328 ± 111	4 of 4	1.17	Up
Whole fly	3688 ± 133	4 of 4

Looking for CG11276-RA. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720