FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG11282-RA through 18771 annotations produced 2 hits

capricious (caps):

Annotation Number : S.C3L001717
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0023095
Gbrowse : chr3L:13270415-13271131 (+) // 100.0 //
Probeset : 1638580_at
Accessions : protein= NP_001036604; /// NP_524056; /// NP_729880;, nucleotide= NM_001043139; /// NM_079332; /// NM_168540;
Pathway : open tracheal system // inferred from mutant phenotype"
Interpro : 0016020 // membrane // non-traceable author statement /// 0042995 // cell projection // inferred from direct assay
FlyMine data for FBgn0023095.
TRiP has 1 RNAi stocks for FBgn0023095 available for purchase.
VDRC has 2 RNAi stocks for FBgn0023095 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	62 ± 3	4 of 4	1.40	Up
Head	51 ± 5	3 of 4	1.20	None
Eye	69 ± 5	4 of 4	1.57	Up
Thoracicoabdominal ganglion	50 ± 6	4 of 4	1.10	None
Salivary gland	88 ± 8	4 of 4	1.99	Up
Crop	144 ± 9	4 of 4	3.30	Up
Midgut	72 ± 5	4 of 4	1.60	Up
Tubule	22 ± 2	2 of 4	0.50	Down
Hindgut	126 ± 8	4 of 4	2.80	Up
Heart	226 ± 6	4 of 4	5.10	Up
Fat body	71 ± 13	3 of 4	1.60	Up
Ovary	13 ± 0	0 of 4	0.30	Down
Testis	18 ± 1	4 of 4	0.40	Down
Male accessory glands	149 ± 15	4 of 4	3.40	Up
Virgin spermatheca	12 ± 1	0 of 4	0.28	Down
Mated spermatheca	20 ± 1	0 of 4	0.46	Down
Adult carcass	94 ± 6	4 of 4	2.10	Up
Larval CNS	46 ± 4	4 of 4	1.05	None
Larval Salivary gland	40 ± 2	1 of 4	0.91	None
Larval midgut	76 ± 3	4 of 4	1.72	Up
Larval tubule	96 ± 2	4 of 4	2.20	Up
Larval hindgut	64 ± 0	4 of 4	1.44	Up
Larval fat body	69 ± 8	4 of 4	1.60	Up
Larval trachea	68 ± 5	4 of 4	1.55	Up
Larval carcass	40 ± 3	4 of 4	0.91	None
S2 cells (growing)	30 ± 2	4 of 4	0.68	Down
Whole fly	44 ± 4	4 of 4

capricious (caps):

Annotation Number : CG11282
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0023095
Gbrowse : chr3L:13221788-13270860 (+) // 100.0 //
Probeset : 1632508_s_at
Accessions : protein= NP_001036604; /// NP_524056; /// NP_729880;, nucleotide= NM_001043139; /// NM_079332; /// NM_168540;
Pathway : open tracheal system // inferred from mutant phenotype"
Interpro : 0016020 // membrane // non-traceable author statement /// 0042995 // cell projection // inferred from direct assay
FlyMine data for FBgn0023095.
Homophila reports that CG11282 is a close match (1e-17) to human gene (NP_003256), a gene associated with .
BioGrid reports that CG11282 interacts with CG4822 CG8376 CG6500 CG3340 CG3340 CG3340 CG3340 CG3340 CG3340 .
TRiP has 1 RNAi stocks for FBgn0023095 available for purchase.
VDRC has 2 RNAi stocks for FBgn0023095 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	15 ± 1	4 of 4	1.10	None
Head	13 ± 1	4 of 4	0.90	None
Eye	10 ± 1	4 of 4	0.77	None
Thoracicoabdominal ganglion	15 ± 3	3 of 4	1.10	None
Salivary gland	28 ± 2	1 of 4	2.00	Up
Crop	49 ± 5	4 of 4	3.50	Up
Midgut	19 ± 1	3 of 4	1.40	None
Tubule	5 ± 0	0 of 4	0.40	Down
Hindgut	35 ± 2	4 of 4	2.50	Up
Heart	41 ± 2	4 of 4	2.95	Up
Fat body	25 ± 16	4 of 4	1.78	None
Ovary	3 ± 0	0 of 4	0.20	Down
Testis	4 ± 0	0 of 4	0.30	Down
Male accessory glands	45 ± 5	4 of 4	3.20	Up
Virgin spermatheca	4 ± 2	0 of 4	0.32	Down
Mated spermatheca	3 ± 1	0 of 4	0.25	Down
Adult carcass	36 ± 2	4 of 4	2.60	Up
Larval CNS	11 ± 1	4 of 4	0.78	None
Larval Salivary gland	8 ± 0	0 of 4	0.63	None
Larval midgut	11 ± 1	3 of 4	0.82	None
Larval tubule	34 ± 1	4 of 4	2.40	Up
Larval hindgut	20 ± 2	4 of 4	1.46	None
Larval fat body	32 ± 7	4 of 4	2.30	None
Larval trachea	11 ± 2	4 of 4	0.78	None
Larval carcass	8 ± 0	0 of 4	0.61	None
S2 cells (growing)	11 ± 0	1 of 4	0.80	None
Whole fly	14 ± 2	2 of 4

Looking for CG11282-RA. 2 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720