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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG11305-RA through 18771 annotations produced 1 hits



Sirt7 (Sirt7):

Annotation Number : CG11305
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0039631
Gbrowse : chr3R:24881653-24884926 (+) // 100.0 //
Probeset : 1634078_at
Accessions : protein= NP_651664;, nucleotide= NM_143407;
Interpro : "0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from elect
FlyMine data for FBgn0039631.
BioGrid reports that CG11305 interacts with CG15224 CG12306 CG12985 CG6822 CG7001 CG6831 .
TRiP has 3 RNAi stocks for FBgn0039631 available for purchase.
VDRC has 2 RNAi stocks for FBgn0039631 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain94 24 of 4 1.50Up
Head32 14 of 4 0.50Down
Eye34 34 of 4 0.56Down
Thoracicoabdominal ganglion82 44 of 4 1.30Up
Salivary gland66 84 of 4 1.09None
Crop45 54 of 4 0.70None
Midgut27 14 of 4 0.40Down
Tubule37 04 of 4 0.60Down
Hindgut35 24 of 4 0.60Down
Heart17 14 of 4 0.29Down
Fat body39 44 of 4 0.65Down
Ovary156 74 of 4 2.50Up
Testis75 34 of 4 1.20None
Male accessory glands36 24 of 4 0.60Down
Virgin spermatheca28 14 of 4 0.46Down
Mated spermatheca26 34 of 4 0.43Down
Adult carcass19 13 of 4 0.30Down
Larval CNS122 54 of 4 2.00Up
Larval Salivary gland39 14 of 4 0.64Down
Larval midgut35 24 of 4 0.58Down
Larval tubule34 14 of 4 0.60Down
Larval hindgut39 24 of 4 0.64Down
Larval fat body32 43 of 4 0.50Down
Larval trachea34 54 of 4 0.57Down
Larval carcass38 14 of 4 0.63Down
S2 cells (growing)30 14 of 4 0.49Down
Whole fly61 44 of 4

Looking for CG11305-RA. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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