FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG11312-RA through 18771 annotations produced 1 hits

Inscutable (insc):

Annotation Number : CG11312
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0011674
Gbrowse : chr2R:16708770-16723569 (-) // 100.0 //
Probeset : 1625035_at
Accessions : protein= NP_477024;, nucleotide= NM_057676;
Pathway : 0005737 // cytoplasm // inferred from direct assay /// 0005938 // cell cortex // inferred from direct assay /// 0045177
Interpro : 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical inter
FlyMine data for FBgn0011674.
BDGP gene expression has embryonic in situ data for insc: 88 pix of staining in 23 body parts.
BioGrid reports that CG11312 interacts with CG17369 CG3048 CG4799 CG10060 CG5460 CG5460 CG3936 CG5692 CG32386 CG32386 .
TRiP has 3 RNAi stocks for FBgn0011674 available for purchase.
VDRC has 2 RNAi stocks for FBgn0011674 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	6 ± 1	3 of 4	0.10	Down
Head	31 ± 2	4 of 4	0.60	None
Eye	13 ± 1	4 of 4	0.26	Down
Thoracicoabdominal ganglion	10 ± 0	4 of 4	0.20	Down
Salivary gland	23 ± 2	2 of 4	0.47	Down
Crop	127 ± 9	4 of 4	2.60	Up
Midgut	127 ± 7	4 of 4	2.60	Up
Tubule	12 ± 1	3 of 4	0.20	Down
Hindgut	75 ± 1	4 of 4	1.50	Up
Heart	122 ± 7	4 of 4	2.47	Up
Fat body	66 ± 3	4 of 4	1.33	None
Ovary	108 ± 4	4 of 4	2.20	Up
Testis	12 ± 2	4 of 4	0.20	Down
Male accessory glands	9 ± 1	1 of 4	0.20	Down
Virgin spermatheca	35 ± 1	4 of 4	0.71	None
Mated spermatheca	51 ± 6	4 of 4	1.04	None
Adult carcass	47 ± 1	4 of 4	1.00	None
Larval CNS	278 ± 25	4 of 4	5.63	Up
Larval Salivary gland	19 ± 0	4 of 4	0.39	Down
Larval midgut	55 ± 7	4 of 4	1.12	None
Larval tubule	15 ± 1	4 of 4	0.30	Down
Larval hindgut	63 ± 3	4 of 4	1.27	None
Larval fat body	57 ± 3	4 of 4	1.20	None
Larval trachea	26 ± 13	4 of 4	0.53	None
Larval carcass	39 ± 4	4 of 4	0.79	None
S2 cells (growing)	19 ± 3	4 of 4	0.40	Down
Whole fly	49 ± 8	4 of 4

Looking for CG11312-RA. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720