Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG1132-RA through 18771 annotations produced 1 hits



forkhead domain 64A (fd64A):

Annotation Number : CG1132
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0004895
Gbrowse : chr3L:4019093-4021179 (+) // 100.0 //
Probeset : 1625523_at
Accessions : protein= NP_523912;, nucleotide= NM_079188;
Pathway : DNA-dependent // inferred from sequence or structural similarity /// 0006355 // regulation of transcription
Interpro : DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred fr
FlyMine data for FBgn0004895.
Homophila reports that CG1132 is a close match (2e-11) to human gene CAGH44;FOXP2;SPCH1;TNRC10 (NP_683696), a gene associated with Speech-language disorder-1, 602081 (3).
BioGrid reports that CG1132 interacts with CG18398 CG5643 CG8494 CG9097 CG1140 CG11652 CG11771 CG18617 CG4621 CG5971 CG6323 CG7937 CG9568 .
VDRC has 3 RNAi stocks for FBgn0004895 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain0 ± 00 of 4 0.10None
Head5 ± 10 of 4 1.20None
Eye4 ± 10 of 4 0.92None
Thoracicoabdominal ganglion3 ± 00 of 4 0.80None
Salivary gland2 ± 00 of 4 0.60None
Crop2 ± 10 of 4 0.60None
Midgut2 ± 00 of 4 0.50None
Tubule4 ± 00 of 4 0.90None
Hindgut27 ± 24 of 4 6.00Up
Heart3 ± 01 of 4 0.67None
Fat body2 ± 10 of 4 0.52None
Ovary1 ± 00 of 4 0.30None
Testis6 ± 02 of 4 1.40None
Male accessory glands1 ± 00 of 4 0.30None
Virgin spermatheca2 ± 10 of 4 0.46None
Mated spermatheca1 ± 00 of 4 0.27None
Adult carcass5 ± 10 of 4 1.10None
Larval CNS1 ± 00 of 4 0.29None
Larval Salivary gland3 ± 10 of 4 0.82None
Larval midgut2 ± 00 of 4 0.57None
Larval tubule3 ± 10 of 4 0.80None
Larval hindgut22 ± 14 of 4 5.02Up
Larval fat body0 ± 00 of 4 0.10None
Larval trachea1 ± 10 of 4 0.38None
Larval carcass4 ± 10 of 4 0.94None
S2 cells (growing)0 ± 00 of 4 0.08None
Whole fly4 ± 10 of 4

Looking for CG1132-RA. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime