FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG11348-RB through 18771 annotations produced 1 hits

AChR protein of Drosophila (nAcRbeta-64B):

Annotation Number : CG11348
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0000038
Gbrowse : chr3L:4429377-4430229 (+) // 100.0 //
Probeset : 1627219_at
Accessions : protein= NP_523927; /// NP_728994;, nucleotide= NM_079203; /// NM_168086;
Pathway : 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // non-trac
Interpro : 0004872 // receptor activity // inferred from electronic annotation /// 0004889 // nicotinic acetylcholine-activated cat
FlyMine data for FBgn0000038.
BDGP gene expression has embryonic in situ data for nAcRbeta-64B: 4 pix of staining in 1 body parts.
Homophila reports that CG11348 is a close match (1e-11) to human gene GLRB (NP_000815), a gene associated with Hyperekplexia, autosomal recessive, 149400 (3).
TRiP has 1 RNAi stocks for FBgn0000038 available for purchase.
VDRC has 6 RNAi stocks for FBgn0000038 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	252 ± 11	4 of 4	43.40	Up
Head	13 ± 2	3 of 4	2.40	Up
Eye	36 ± 4	4 of 4	6.27	Up
Thoracicoabdominal ganglion	275 ± 14	4 of 4	47.30	Up
Salivary gland	15 ± 3	1 of 4	2.57	None
Crop	10 ± 0	1 of 4	1.70	None
Midgut	2 ± 0	0 of 4	0.50	None
Tubule	8 ± 1	1 of 4	1.50	Up
Hindgut	7 ± 2	1 of 4	1.20	None
Heart	2 ± 0	0 of 4	0.39	None
Fat body	27 ± 16	3 of 4	4.66	None
Ovary	3 ± 1	0 of 4	0.50	None
Testis	2 ± 0	0 of 4	0.40	None
Male accessory glands	11 ± 2	0 of 4	1.90	None
Virgin spermatheca	50 ± 5	4 of 4	8.72	Up
Mated spermatheca	63 ± 23	3 of 4	10.81	None
Adult carcass	6 ± 0	0 of 4	1.10	None
Larval CNS	50 ± 5	4 of 4	8.70	Up
Larval Salivary gland	8 ± 1	2 of 4	1.53	None
Larval midgut	6 ± 1	0 of 4	1.04	None
Larval tubule	8 ± 2	1 of 4	1.50	None
Larval hindgut	7 ± 1	1 of 4	1.24	None
Larval fat body	6 ± 1	0 of 4	1.00	None
Larval trachea	3 ± 2	0 of 4	0.61	None
Larval carcass	4 ± 1	0 of 4	0.79	None
S2 cells (growing)	5 ± 0	0 of 4	0.89	None
Whole fly	5 ± 2	0 of 4

Looking for CG11348-RB. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720