Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG1137-RA through 18771 annotations produced 1 hits



(CG1137):

Annotation Number : CG1137
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037454
Gbrowse : chr3R:2384336-2386073 (-) // 100.0 //
Probeset : 1628736_at
Accessions : protein= NP_649665;, nucleotide= NM_141408;
Interpro : 0008233 // peptidase activity // inferred from sequence or structural similarity /// 0016787 // hydrolase activity // in
FlyMine data for FBgn0037454.
BioGrid reports that CG1137 interacts with CG11763 CG16728 CG2699 CG4325 .
VDRC has 1 RNAi stocks for FBgn0037454 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain2 00 of 4 0.00Down
Head3 00 of 4 0.00Down
Eye2 10 of 4 0.02Down
Thoracicoabdominal ganglion2 00 of 4 0.00Down
Salivary gland7 20 of 4 0.06Down
Crop2 00 of 4 0.00Down
Midgut1 10 of 4 0.00Down
Tubule1 00 of 4 0.00Down
Hindgut2 00 of 4 0.00Down
Heart1 00 of 4 0.01Down
Fat body5 10 of 4 0.05Down
Ovary1 00 of 4 0.00Down
Testis1148 244 of 4 9.80Up
Male accessory glands2 10 of 4 0.00Down
Virgin spermatheca2 00 of 4 0.02Down
Mated spermatheca3 10 of 4 0.03Down
Adult carcass3 10 of 4 0.00Down
Larval CNS2 10 of 4 0.02Down
Larval Salivary gland5 20 of 4 0.05Down
Larval midgut3 10 of 4 0.03Down
Larval tubule2 10 of 4 0.00Down
Larval hindgut2 10 of 4 0.02Down
Larval fat body112 594 of 4 1.00None
Larval trachea6 51 of 4 0.05Down
Larval carcass2 00 of 4 0.02Down
S2 cells (growing)4 00 of 4 0.04Down
Whole fly117 124 of 4

Looking for CG1137-RA. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime