FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG1139-RA through 18771 annotations produced 1 hits

(CG1139):

Annotation Number : CG1139
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0035300
Gbrowse : chr3L:1971661-1974285 (+) // 100.0 //
Probeset : 1636631_at
Accessions : protein= NP_647686;, nucleotide= NM_139429;
Pathway : 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electron
Interpro : 0015171 // amino acid transmembrane transporter activity // inferred from sequence or structural similarity
FlyMine data for FBgn0035300.
BDGP gene expression has embryonic in situ data for CG1139: 8 pix of staining in 1 body parts.
VDRC has 2 RNAi stocks for FBgn0035300 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	2 ± 0	0 of 4	0.10	Down
Head	9 ± 0	3 of 4	0.30	Down
Eye	2 ± 1	0 of 4	0.10	Down
Thoracicoabdominal ganglion	3 ± 1	0 of 4	0.10	Down
Salivary gland	4 ± 1	0 of 4	0.14	Down
Crop	6 ± 2	2 of 4	0.20	Down
Midgut	265 ± 12	4 of 4	8.80	Up
Tubule	1727 ± 63	4 of 4	57.50	Up
Hindgut	63 ± 3	4 of 4	2.10	Up
Heart	3 ± 1	0 of 4	0.11	Down
Fat body	6 ± 0	0 of 4	0.20	Down
Ovary	2 ± 1	0 of 4	0.10	Down
Testis	5 ± 0	3 of 4	0.20	Down
Male accessory glands	4 ± 2	0 of 4	0.20	Down
Virgin spermatheca	3 ± 1	0 of 4	0.11	Down
Mated spermatheca	5 ± 1	1 of 4	0.20	Down
Adult carcass	9 ± 2	1 of 4	0.30	Down
Larval CNS	4 ± 1	1 of 4	0.16	Down
Larval Salivary gland	4 ± 2	0 of 4	0.15	Down
Larval midgut	10 ± 1	3 of 4	0.33	Down
Larval tubule	631 ± 45	4 of 4	21.00	Up
Larval hindgut	23 ± 4	4 of 4	0.77	None
Larval fat body	7 ± 1	1 of 4	0.20	Down
Larval trachea	34 ± 15	4 of 4	1.15	None
Larval carcass	514 ± 94	4 of 4	17.12	Up
S2 cells (growing)	2 ± 1	0 of 4	0.08	Down
Whole fly	30 ± 3	4 of 4

Looking for CG1139-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720