FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG11427-RA through 18771 annotations produced 1 hits

ruby (rb):

Annotation Number : CG11427
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0003210
Gbrowse : chrX:4429661-4434669 (-) // 100.0 //
Probeset : 1634289_at
Accessions : protein= NP_001162664; /// NP_525071;, nucleotide= NM_001169193; /// NM_080332;
Pathway : 0005794 // Golgi apparatus // inferred from electronic annotation /// 0008021 // synaptic vesicle // traceable author st
Interpro : 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic ann
FlyMine data for FBgn0003210.
Homophila reports that CG11427 is a close match (0) to human gene ADTB3A;AP3B1;HPS2 (NP_003655), a gene associated with Hermansky-Pudlak syndrome 2, 608233 (3).
BioGrid reports that CG11427 interacts with CG14098 CG1676 CG14870 CG15154 CG15631 CG17489 CG2009 CG3294 CG3508 CG3919 CG4454 CG4617 CG5170 CG6930 CG7945 CG8669 CG8947 CG9535 .
TRiP has 2 RNAi stocks for FBgn0003210 available for purchase.
VDRC has 2 RNAi stocks for FBgn0003210 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	201 ± 3	4 of 4	1.50	Up
Head	195 ± 14	4 of 4	1.50	Up
Eye	242 ± 5	4 of 4	1.82	Up
Thoracicoabdominal ganglion	219 ± 3	4 of 4	1.60	Up
Salivary gland	220 ± 6	4 of 4	1.65	Up
Crop	276 ± 12	4 of 4	2.10	Up
Midgut	89 ± 6	4 of 4	0.70	Down
Tubule	88 ± 3	4 of 4	0.70	Down
Hindgut	140 ± 5	4 of 4	1.10	None
Heart	143 ± 2	4 of 4	1.07	None
Fat body	186 ± 18	4 of 4	1.40	Up
Ovary	212 ± 5	4 of 4	1.60	Up
Testis	43 ± 1	4 of 4	0.30	Down
Male accessory glands	86 ± 8	4 of 4	0.60	Down
Virgin spermatheca	239 ± 11	4 of 4	1.79	Up
Mated spermatheca	282 ± 18	4 of 4	2.12	Up
Adult carcass	155 ± 6	4 of 4	1.20	None
Larval CNS	249 ± 16	4 of 4	1.87	Up
Larval Salivary gland	276 ± 6	4 of 4	2.07	Up
Larval midgut	85 ± 3	4 of 4	0.64	Down
Larval tubule	129 ± 5	4 of 4	1.00	None
Larval hindgut	161 ± 3	4 of 4	1.21	None
Larval fat body	209 ± 14	4 of 4	1.60	Up
Larval trachea	242 ± 19	4 of 4	1.82	Up
Larval carcass	243 ± 9	4 of 4	1.82	Up
S2 cells (growing)	158 ± 7	4 of 4	1.19	None
Whole fly	133 ± 12	4 of 4

Looking for CG11427-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720