FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG11525-RD through 18771 annotations produced 1 hits

chr3R:27424171-27438386 (-) // 100.0 // (cyclin G1):

Annotation Number : CG11525
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : full length
Gbrowse : March 2006 (FlyBase/BDGP 5.3)
Probeset : 1632248_s_at
Accessions : protein= , nucleotide= NP_524609; /// NP_733434; /// NP_733435; /// NP_733436; /// NP_733437;
Interpro : 0005700 // polytene chromosome // inferred from direct assay
FlyMine data for full length.
BioGrid reports that CG11525 interacts with CG5151 CG5643 CG11533 CG11661 CG1435 CG1475 CG14792 CG15753 CG1721 CG17489 CG2238 CG31961 CG3499 CG3552 CG3929 CG4365 CG4533 CG4980 CG5053 CG5363 CG8470 CG8947 CG9184 CG9426 CG1252 CG2360 CG18278 CG1034 CG13510 CG14119 CG32381 CG15043 CG9046 CG2948 CG31204 CG5708 CG11182 CG7281 CG2944 CG13806 CG32139 CG5473 CG31000 CG32045 CG7948 CG15218 CG31679 CG12723 CG31811 CG16892 CG9930 CG14619 CG2189 CG13625 CG6521 CG4673 CG15112 CG17309 CG11486 CG4184 CG13900 CG17964 CG32169 CG1765 CG18745 CG5643 CG5003 CG8181 .

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	1582 ± 38	4 of 4	1.50	Up
Head	1334 ± 48	4 of 4	1.20	Up
Eye	3333 ± 176	4 of 4	3.10	Up
Thoracicoabdominal ganglion	1323 ± 61	4 of 4	1.20	Up
Salivary gland	3628 ± 218	4 of 4	3.38	Up
Crop	1468 ± 23	4 of 4	1.40	Up
Midgut	1279 ± 21	4 of 4	1.20	Up
Tubule	1236 ± 63	4 of 4	1.20	Up
Hindgut	1736 ± 37	4 of 4	1.60	Up
Heart	2699 ± 118	4 of 4	2.51	Up
Fat body	1784 ± 142	4 of 4	1.66	Up
Ovary	1252 ± 9	4 of 4	1.20	Up
Testis	945 ± 40	4 of 4	0.90	Down
Male accessory glands	1636 ± 44	4 of 4	1.50	Up
Virgin spermatheca	842 ± 48	4 of 4	0.78	Down
Mated spermatheca	973 ± 16	4 of 4	0.91	Down
Adult carcass	1044 ± 67	4 of 4	1.00	None
Larval CNS	1101 ± 60	4 of 4	1.03	None
Larval Salivary gland	2236 ± 80	4 of 4	2.08	Up
Larval midgut	1893 ± 39	4 of 4	1.76	Up
Larval tubule	2679 ± 42	4 of 4	2.50	Up
Larval hindgut	1897 ± 104	4 of 4	1.77	Up
Larval fat body	1323 ± 42	4 of 4	1.20	Up
Larval trachea	2488 ± 114	4 of 4	2.32	Up
Larval carcass	2083 ± 100	4 of 4	1.94	Up
S2 cells (growing)	1772 ± 27	4 of 4	1.65	Up
Whole fly	1073 ± 20	4 of 4

Looking for CG11525-RD. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720